Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt3a18
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 35 0.059
06_01_1013 - 7931756-7935109 33 0.18
07_03_0283 + 16241231-16241625,16241774-16241783 32 0.42
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 32 0.42
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 31 0.73
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547... 31 0.73
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 31 0.73
01_06_1106 + 34563368-34563679 31 0.73
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 31 1.3
10_01_0006 + 74000-76441 31 1.3
08_02_1037 - 23851750-23852132,23852622-23852784 31 1.3
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127 31 1.3
05_01_0110 - 741968-742279 31 1.3
03_06_0297 - 32924162-32924605 30 1.7
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 30 2.2
03_05_0615 + 26137785-26138593,26139307-26141368 30 2.2
12_01_0317 + 2417147-2417587,2417622-2418134 29 2.9
12_01_0072 + 609254-609722,610355-610421,610652-610745,610984-61... 29 2.9
11_03_0105 + 10040421-10040891,10041375-10041499,10041884-10042748 29 2.9
10_08_0631 - 19435796-19436452,19437237-19438130 29 2.9
02_05_0496 - 29499959-29500653,29501039-29501093 29 2.9
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 29 2.9
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 29 3.9
04_04_1496 + 33986938-33987225,33988545-33988664 29 3.9
03_05_0437 - 24293236-24294120 29 3.9
10_08_0933 + 21661209-21662813 29 5.2
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 29 5.2
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 5.2
10_01_0216 - 2329413-2330419,2331382-2331537,2332363-2332897,233... 28 6.8
09_04_0373 - 17037945-17040641 28 6.8
06_03_0969 - 26413534-26413594,26415020-26415318 28 6.8
03_02_0613 - 9848514-9848539,9848942-9849200,9849326-9849365,984... 28 6.8
02_05_1324 - 35702184-35702267,35702405-35702476,35702675-357027... 28 6.8
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 28 6.8
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 28 9.0
11_01_0469 + 3638493-3641166,3641286-3641653 28 9.0
11_01_0461 + 3569700-3572373,3572477-3572847 28 9.0
06_01_0368 + 2645007-2645317,2645422-2645509,2648927-2649183,264... 28 9.0
05_01_0433 - 3432675-3432922,3433043-3433304,3433413-3433567,343... 28 9.0
04_04_1286 + 32387687-32387908,32388046-32389494 28 9.0
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963... 28 9.0
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 35.1 bits (77), Expect = 0.059
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 168 PGDTVR-APHPGRHVPGAHAPHPGQSAPRRTEVRDQPAVRTQHGPAGRHRAAP 323
PG R AP P RH GA APHPG+ +P + P+ + P G AAP
Sbjct: 54 PGPAARHAPGPARH-HGAPAPHPGRRSPPAPAPANPPS--SDPMPGGAPSAAP 103
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 33.5 bits (73), Expect = 0.18
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 123 NSRKKNKNGSTA-DIQPGDTVRAPHPGRHVPGAHAPHPGQSAPRRTEVRDQPAVRTQHGP 299
+SR + STA DI P AP P R P +P+P S R + + +P R HG
Sbjct: 23 SSRAVWRPRSTAPDIPPPPRAAAPAPDRIGPILPSPNPA-SEDRPQQQQRRPR-RRNHGG 80
Query: 300 AGRHRAAPQLPLRGDVRRAEPPQQHE 377
G+ R PQ R PP Q +
Sbjct: 81 GGQRRGPPQ--ERPSAAPPPPPPQQQ 104
>07_03_0283 + 16241231-16241625,16241774-16241783
Length = 134
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = -1
Query: 362 WFRTTHISTKRKLRCSAMSSRGSVLGPHCRLIANLCAPGGTLPWMRSMRPG-YMP-PGMG 189
WF ++ + C A +S S HC + +L + G ++R G +P PG
Sbjct: 6 WFLAAAVAAMAVVACFAATSSSSSSQLHCGTVTSLLS--GCAAFVRGHGGGAQLPSPGTP 63
Query: 188 CTHGITGLY 162
C G+ GLY
Sbjct: 64 CCDGVAGLY 72
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 123 NSRKKNKNGSTADIQPGDTVRAPHPGRHVPGAHAPHPGQSAP--RRTEVRDQPAVRTQHG 296
N +K N++ + +D++ G + PH + PG HP S P + +P R G
Sbjct: 231 NLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGG 290
Query: 297 P 299
P
Sbjct: 291 P 291
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Frame = -3
Query: 519 LQPVRELAEVHAVQRHLEGARLAQHQRL--EGLPVGVQR---HPARR 394
LQP +L + H +Q+ L+ +L QH +L +GLP+ Q+ HP ++
Sbjct: 678 LQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQ 724
>07_01_0716 +
5472618-5472818,5472943-5472985,5473672-5473761,
5473863-5473938,5474435-5474504,5474911-5475075,
5475261-5475404,5475547-5475651,5475876-5476022,
5476463-5476531,5476882-5476989,5477392-5477483,
5477559-5477598,5478129-5478221,5478386-5478958,
5479596-5479610
Length = 676
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 485 PFSATLRARGSHSTSASK--VSPLACSGIPPAVSSAPQLMLLRWFR 354
P S+ + A GS +T A + S SGIPPA S P + L W R
Sbjct: 540 PSSSAVTAGGSTATIAGEGSTSDSGLSGIPPAASPPPPPLPLSWRR 585
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 488 TPFSATLRARGSHSTSASKVSPLACSGIPPAVSSAPQL 375
T + L +G H+ +A++ + L G PP SSAPQ+
Sbjct: 309 TSVISCLPEQGKHAAAAARPTALTLGGAPPHESSAPQI 346
>01_06_1106 + 34563368-34563679
Length = 103
Score = 31.5 bits (68), Expect = 0.73
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Frame = +3
Query: 150 STAD-IQPGDTVRAPHPGRHVPGAHAPHP-----GQSAPRRTEVRDQPAVRTQHGPAGRH 311
STAD + + P PGR P A AP P G + RR R R +HGP H
Sbjct: 19 STADRLGAASSQAPPRPGRVPPSASAPPPAELRHGPNRCRRPPWRRLQPARLRHGPDKHH 78
Query: 312 RAAPQLPLRGDVRRAEPP 365
AEPP
Sbjct: 79 LQLGSAVASPLALVAEPP 96
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Frame = -1
Query: 398 AVSSAPQLMLLRWFRTTHISTKRKLRCS-AMSSRGSVLGPHCRLIANLCAPG-GTLPWMR 225
A+S PQ LL W +TH + + CS R + L R + L +P G L +
Sbjct: 1325 AISLDPQHALLSWNDSTHFCSWEGVSCSLRYPRRVTSLDLSNRGLVGLISPSLGNLTSLE 1384
Query: 224 ------SMRPGYMPPGMGCTHGITGLYIGGTAI 144
+ G +PP +G H + LY+ +
Sbjct: 1385 HLFLNTNQLSGQIPPSLGHLHHLRSLYLANNTL 1417
>10_01_0006 + 74000-76441
Length = 813
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 278 CRLIANLCAPGGTLPWMRSMRPGYMPPGMGC 186
C+ AN+C P G PGY P G+GC
Sbjct: 277 CQGEANICVPQGADNTTCVCPPGYRPQGLGC 307
>08_02_1037 - 23851750-23852132,23852622-23852784
Length = 181
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -1
Query: 590 CA-PSNPMNCTSTSPSTV---RCEMRWY-CS---RCGNSQKCTPFSATLRARGSHSTSAS 435
CA SN ++ TSTSP+T+ M +Y C+ C K + GS S +
Sbjct: 75 CAVASNSISSTSTSPATLDLAAAGMHYYICTISGHCAGGMKLAINVGSGSGSGSGSGTPP 134
Query: 434 KVSPLACSGIPPAVSSAP 381
+P SG PPA S+P
Sbjct: 135 STTP-GSSGTPPATPSSP 151
>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
Length = 649
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Frame = +1
Query: 94 STARHAQTFETQGKRIKMAVPPIYNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAIN 273
+TA H + T RI++ + +P + + P G YP + I+G V Q F +
Sbjct: 224 NTALH---YATSAGRIRVVNLLLEDPTLAYL-PNSYGQYPVHIAAIKGHVHIVDQFFELY 279
Query: 274 LQCGPNTDPRDDIALHLNFRFVEMCVVRNHLSNMSW----GAEETAGGMPLH 417
CG D ALH + VV N + S+ + G PLH
Sbjct: 280 PNCGELLDNNGRNALHCAIEHGRIKVVTNICKSPSFTQMMNTRDKQGNTPLH 331
>05_01_0110 - 741968-742279
Length = 103
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 189 PHPGRHVP--GAHAPHPGQSAPRRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGDVRRAEP 362
P P P G+HAP PG AP R + + A R + A RAA P R P
Sbjct: 2 PPPRADAPLLGSHAPLPGGPAPPRRGLERRIAARGRRAVAWEPRAAVGSPRATTARPGAP 61
>03_06_0297 - 32924162-32924605
Length = 147
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 168 PGDTVRAPHPGRHVPGAHAPHPGQSAPRRTEVRDQP 275
PG V P PG PG P P +P EV D P
Sbjct: 74 PGLDVPMPPPGAPTPGPEQPGPSIPSPPMPEVPDVP 109
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 510 VRELAEVHAVQRHL--EGARLAQHQRLEGLPVGVQRHPARRLLGAPAHVAEVVP 355
V E + ++ + R L GA H+ L L +R+ + LG P H+A V P
Sbjct: 460 VEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGVPHHIAGVTP 513
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 245 GTLPWMRSMRPGYMPPGMGCTHGIT 171
G +PW+++ R +MP C HG++
Sbjct: 840 GAMPWVQTFRLWFMPCWKSCDHGVS 864
>12_01_0317 + 2417147-2417587,2417622-2418134
Length = 317
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 560 STSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSA--SKVSPLACSGIPPAVSS 387
S S + +R + S G+ CT S+T RGS + A S +S A + A SS
Sbjct: 3 SASSLLLPSSVRDFASCIGDGAACTAPSSTRTRRGSAAVQAQPSTLSVTASYRVALASSS 62
Query: 386 APQLML-LRW 360
+P L L L W
Sbjct: 63 SPPLQLRLTW 72
>12_01_0072 +
609254-609722,610355-610421,610652-610745,610984-611127
Length = 257
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 584 PSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSASKVSPLACSG- 408
PS P N + P + + S C S TP S A G + S + L CS
Sbjct: 41 PSTPTNPITARPRPLPSDTTAAASTCSASPSHTPVSKPSSATGETAAPQSNLCALRCSSW 100
Query: 407 --IPPAVSSAPQLMLLR 363
+ A+++A + L++
Sbjct: 101 DFLTLAIAAAEERSLVK 117
>11_03_0105 + 10040421-10040891,10041375-10041499,10041884-10042748
Length = 486
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 644 TALRPPPTEPRATVRSKGSTEESGRGA 724
T+L PPP P AT S +T E RGA
Sbjct: 18 TSLHPPPCSPAATAASATTTCEPVRGA 44
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 437 SKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCS 315
SK L CS IP +S L RTT I TK+ ++C+
Sbjct: 476 SKRWHLVCSNIPNNISYLVSTFTLANCRTTDIGTKKVMQCA 516
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 207 VPGAHAPHPGQSAPRRTEVRDQPAVRTQHGPAGRHRAAPQLP 332
+P A PH QS + + PA + QHGP H A P
Sbjct: 64 IPPAEPPHQ-QSPEPQPQTPPPPAQQQQHGPEHEHHQAQPQP 104
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 404 PPAVSSAPQLMLLRWFRTTHISTKRKL 324
P V P LML WFR +IST R+L
Sbjct: 1105 PSVVLVVPLLMLNLWFRKYYISTSREL 1131
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 183 RAPHPGRHVPGAHAPHPGQSAPRRTEVRDQPAV--RTQH-GPAGRHRAAPQLPLRGDVRR 353
R P P +P PHP + PR E+ R QH G A R ++ L G RR
Sbjct: 119 RPPPPPPEMPVGMHPHPHEPPPRFQELGAWEGFRPRRQHAGVAAPLRFGQRMLLGGAERR 178
Query: 354 AEPP 365
PP
Sbjct: 179 WSPP 182
>04_04_1496 + 33986938-33987225,33988545-33988664
Length = 135
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 147 GSTADIQPGDTVRAPHPGRHVPGAHAPHPGQSAPRRTEVRDQ 272
G+ AD++ GD+V A P R ++A G +A R E +++
Sbjct: 32 GAAADLEAGDSVAADPPARPSSRSYARLRGLTATRPQEAKER 73
>03_05_0437 - 24293236-24294120
Length = 294
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 422 LACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMSSRGSVLGPHCRLIANLCAPGG 243
LA +PPA + +L RW R TH+ K S+ + + L HC +A L G
Sbjct: 131 LALPELPPADDARLPSLLPRWRRLTHLELDSK--PSSFPAVAAALALHCPDLAVLRVTSG 188
Query: 242 TL 237
++
Sbjct: 189 SV 190
>10_08_0933 + 21661209-21662813
Length = 534
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 162 IQPGDTV-RAPHPGRHVPGAHAPHPGQSAPRRTEVRDQPAVRTQHGPAGRH 311
+ GD V R P P G H G A R + RD P +R GPA H
Sbjct: 407 VNAGDVVTRVPAPAMAREGEGHVHAG--AELRLDSRDSPCLRPDAGPACCH 455
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = -3
Query: 546 HREVRDALVLQP--VRELAEVHAVQRHLEGARLAQHQRLEGLPVGVQRHPARRLLGAPAH 373
HRE + AL + + L+E + +++ ++ L+ V + + R +L AP H
Sbjct: 145 HREAKAALAVTKAEIGRLSEENKRLKNMLSNVTTKYNSLQMQFVTLMQQ-RRSVLAAPIH 203
Query: 372 VAEVVPHDAHLHEAEVEVQRDVVPR--VRVGSA-LQVDRE 262
E++ + E + Q+ ++PR + +GSA LQ D E
Sbjct: 204 QQELLDPEKKEQEGSQQQQQQLIPRQFISLGSASLQPDVE 243
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 GDTVRAPHPGRHVPGAHAPHPGQSAPRRTEVRDQPAVRTQHGPAGRH----RAAPQLPLR 338
G P P P A AP P Q RR+ + PA P G H RAA +P+
Sbjct: 3 GSAAIPPRPAP-TPPAPAPAPPQVFLRRSVLPPPPAPHHAPPPPGAHVHYFRAASPIPIF 61
Query: 339 GDVRRAEPPQ 368
+ PP+
Sbjct: 62 RAAASSRPPR 71
>10_01_0216 -
2329413-2330419,2331382-2331537,2332363-2332897,
2333026-2333514
Length = 728
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 512 RCGNSQKCTPFSATLRA-RGSH---STSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTH 345
R G KC T ++ RG+ + + + +ACSG+PP V A ++ L + + T
Sbjct: 410 RIGEGFKCKYCKMTRKSGRGTRLKEHLAGRRHNVIACSGVPPKVRKAMRISLNKVKQRTK 469
Query: 344 ISTKRKLRCSAMSSRGSV 291
+ R+ + +++ V
Sbjct: 470 AAKNRRAKMKKPNTQNMV 487
>09_04_0373 - 17037945-17040641
Length = 898
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -1
Query: 542 VRCEMRWYCSRCGNSQKCT-P--FSATLRARGS--HSTSASKVSPLACSGIPPAVSSAPQ 378
++C YCS GN CT P F+A++ GS ++ SP AC + A
Sbjct: 293 LQCPSLGYCSPAGNGSTCTCPPLFAASVTVAGSCTPGDGSTLASPAACQNNDSSSGGASV 352
Query: 377 LMLLRWFRTTHISTK 333
+ T++ +TK
Sbjct: 353 SYIALKPLTSYFATK 367
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 28.3 bits (60), Expect = 6.8
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = -1
Query: 608 LAGGGGCAPSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSASKV 429
LAGG A +P R RW SR +Q +A R+RG T A +
Sbjct: 19 LAGGDEAAQGSPAAAARRRSRAARATARWR-SRAA-AQGSPAAAARRRSRG---TQARR- 72
Query: 428 SPLACSGIPPAVSSAPQLMLLR 363
P A + PPA++ PQ R
Sbjct: 73 -PPAAARRPPAMARGPQAQARR 93
>03_02_0613 -
9848514-9848539,9848942-9849200,9849326-9849365,
9849952-9850117,9850228-9850756
Length = 339
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = +3
Query: 84 AVIKHCKARPNV*NSRKKNKN----GSTADIQPGDTVR-APH--PGRHVPGAHAPHPGQS 242
A K C+ V N R+ N N G+ QP +R +P PG H P +PH Q
Sbjct: 115 AAKKACEDATPVINGRRANCNLASLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQP 174
Query: 243 AP 248
AP
Sbjct: 175 AP 176
>02_05_1324 -
35702184-35702267,35702405-35702476,35702675-35702740,
35702826-35702857,35702941-35703100,35703254-35703389,
35703453-35703598,35703827-35704072,35704152-35704259,
35704436-35704557,35704730-35704820,35704903-35705133,
35705212-35705355,35705875-35705951,35706158-35706281,
35706368-35706535,35706625-35706948
Length = 776
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 194 SRAACTRGACSASRAECPPAHRGSRSTCSA 283
SRA A S RA CP + R S +TCSA
Sbjct: 37 SRALLLLPASSPLRAFCPASRRPSPATCSA 66
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 165 QPGDTVRAPHPGRHVPGAHAPH-PGQSAPRRTEVRDQPAV-RTQHGPAGRHRAAPQLPL- 335
+P D AP P A +PH P SAP + +PA + AG +R +P
Sbjct: 80 RPEDGPAAPRPDPPAAPASSPHPPPPSAPVAPAQQGEPAAPASDDVSAGPNRDGGAVPNG 139
Query: 336 RGDVRRA 356
GDVR A
Sbjct: 140 HGDVRAA 146
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = +3
Query: 189 PHPGRHVPGAHAPHPGQSAPRRTEVRDQPAVRTQHGP----AGRHRAAPQLPLRGDVRRA 356
P P V P P ++PR + ++P+ Q P AG A P P+ ++
Sbjct: 309 PVPEPPVASPPVPEPPVASPRTKKDAEEPSESVQAEPTKLAAGEIEAVPDQPMPDQPEQS 368
Query: 357 EP-PQQHE 377
+P P Q E
Sbjct: 369 QPEPSQPE 376
>11_01_0469 + 3638493-3641166,3641286-3641653
Length = 1013
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = -1
Query: 449 STSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMS-SRGSVLGPHCR 273
ST + L+ A+S PQ L+ W +T+ + + CS + R + L R
Sbjct: 24 STFGNGTDQLSLLEFKKAISLDPQQSLISWNDSTNYCSWEGVSCSLKNPGRVTSLNLTNR 83
Query: 272 LIANLCAPG-GTLPWMRSMR------PGYMPPGMGCTHGITGLYIGGTAI 144
+ +P G L +++ + G +PP +G + LY+ G +
Sbjct: 84 ALVGHISPSLGNLTFLKYLALLKNALSGEIPPSLGHLRRLQYLYLSGNTL 133
>11_01_0461 + 3569700-3572373,3572477-3572847
Length = 1014
Score = 27.9 bits (59), Expect = 9.0
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Frame = -1
Query: 449 STSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMS-SRGSVLGPHCR 273
S++ ++ L+ A++ PQ L+ W + H+ + ++C + R L +
Sbjct: 24 SSNGNETDRLSLLEFKNAITLDPQQALMSWNDSNHVCSWEGVKCRVKAPHRVIYLNLSGQ 83
Query: 272 LIANLCAPG-GTLPWMR------SMRPGYMPPGMGCTHGITGLYIGGTAI---FILFP*V 123
+ +P G L ++R ++ G +P +G H + LY+ + F
Sbjct: 84 GLVGTISPSLGNLTFLRYISLQENLLAGQIPLSLGHMHHLKVLYLSNNTLQGEIPDFANC 143
Query: 122 SNVWACL 102
SN+WA L
Sbjct: 144 SNLWALL 150
>06_01_0368 +
2645007-2645317,2645422-2645509,2648927-2649183,
2649453-2649504,2649527-2649838
Length = 339
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 156 ADIQPGDTVRAPHPGRHVPGAHAPHPGQSAPRRTEV 263
AD+ P R P P P AH P P +PR+ V
Sbjct: 190 ADVAPQ---RPPRPTGPRPAAHVPRPTPPSPRKVSV 222
>05_01_0433 -
3432675-3432922,3433043-3433304,3433413-3433567,
3433720-3433905,3435829-3436132
Length = 384
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 400 GGMPLHANGETFEALVLCEPRALKVALNGVHFCEF 504
GG P + F LCEP + ++ +GVHF +F
Sbjct: 315 GGPPYNFKPGKFGCDDLCEPGSKVLSWDGVHFTDF 349
>04_04_1286 + 32387687-32387908,32388046-32389494
Length = 556
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = -1
Query: 455 SHSTSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMSS--RGSVLGP 282
+ + ++K +A +P + + + WF+TT + K R A+ S R + L
Sbjct: 194 AEAEKSTKYGQIAAEELPKGLYCLGVRLTMEWFKTTELQRKFTERSPAVQSNLRDNSLYH 253
Query: 281 HCRLIANLCAPGGTL--PWMRSMRP 213
+C N+ A + + SMRP
Sbjct: 254 YCVFSDNILAVSVVVNSTTLNSMRP 278
>01_01_1197 -
9630506-9630681,9630774-9630805,9630894-9630988,
9631569-9631642,9631732-9631843,9631967-9632030,
9632210-9632275,9632396-9632526,9632884-9633021,
9633115-9633227,9633306-9633471,9633588-9633701,
9633791-9633853,9633953-9634060,9634143-9634259,
9634343-9634505,9634646-9634743,9634852-9634949,
9635054-9635190,9635309-9635530,9635625-9635830,
9636758-9636845,9638085-9638668
Length = 1054
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -1
Query: 362 WFRTTHISTKRKLRCSAMSSRGSVLGPH--CRLIANLCAPGGTLPWMRSMRPGY 207
W H S +RK RC RG+ LG C L P G PGY
Sbjct: 83 WVGGLHRSIRRKCRCHVYRERGTTLGETNCCHLQVGPDLPPGPTVSEYVSPPGY 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,993,074
Number of Sequences: 37544
Number of extensions: 455065
Number of successful extensions: 2221
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2214
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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