Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a13
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067476-1|AAH67476.1|  540|Homo sapiens G protein-coupled recep...    30   7.8  
BC067475-1|AAH67475.1|  540|Homo sapiens G protein-coupled recep...    30   7.8  
AF101472-1|AAD22770.1|  540|Homo sapiens G protein-coupled recep...    30   7.8  
AF072693-1|AAD19849.1|  540|Homo sapiens G protein-coupled recep...    30   7.8  
AC008068-1|AAY15018.1|  540|Homo sapiens unknown protein.              30   7.8  

>BC067476-1|AAH67476.1|  540|Homo sapiens G protein-coupled receptor
           75 protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 370 FLSFNCDFILSKCNLSICKQFRCFLIFDKAS-VIHFSSANN*VSSAIRLFNLTADIFNIE 194
           F  F  +F     NLS C  F C +     + V+ FSSA++   +    F+LT+  F I 
Sbjct: 72  FRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIM 131

Query: 193 TLKNI 179
           +LK +
Sbjct: 132 SLKTV 136


>BC067475-1|AAH67475.1|  540|Homo sapiens G protein-coupled receptor
           75 protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 370 FLSFNCDFILSKCNLSICKQFRCFLIFDKAS-VIHFSSANN*VSSAIRLFNLTADIFNIE 194
           F  F  +F     NLS C  F C +     + V+ FSSA++   +    F+LT+  F I 
Sbjct: 72  FRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIM 131

Query: 193 TLKNI 179
           +LK +
Sbjct: 132 SLKTV 136


>AF101472-1|AAD22770.1|  540|Homo sapiens G protein-coupled receptor
           75 protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 370 FLSFNCDFILSKCNLSICKQFRCFLIFDKAS-VIHFSSANN*VSSAIRLFNLTADIFNIE 194
           F  F  +F     NLS C  F C +     + V+ FSSA++   +    F+LT+  F I 
Sbjct: 72  FRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIM 131

Query: 193 TLKNI 179
           +LK +
Sbjct: 132 SLKTV 136


>AF072693-1|AAD19849.1|  540|Homo sapiens G protein-coupled receptor
           75 protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 370 FLSFNCDFILSKCNLSICKQFRCFLIFDKAS-VIHFSSANN*VSSAIRLFNLTADIFNIE 194
           F  F  +F     NLS C  F C +     + V+ FSSA++   +    F+LT+  F I 
Sbjct: 72  FRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIM 131

Query: 193 TLKNI 179
           +LK +
Sbjct: 132 SLKTV 136


>AC008068-1|AAY15018.1|  540|Homo sapiens unknown protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -1

Query: 370 FLSFNCDFILSKCNLSICKQFRCFLIFDKAS-VIHFSSANN*VSSAIRLFNLTADIFNIE 194
           F  F  +F     NLS C  F C +     + V+ FSSA++   +    F+LT+  F I 
Sbjct: 72  FRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIM 131

Query: 193 TLKNI 179
           +LK +
Sbjct: 132 SLKTV 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,782,453
Number of Sequences: 237096
Number of extensions: 1431248
Number of successful extensions: 2352
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)