Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a13
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003746-1|AAO41407.1|  556|Drosophila melanogaster RH70415p pro...    29   5.2  
BT003617-1|AAO39620.1|  556|Drosophila melanogaster GH12103p pro...    29   5.2  
AF495381-1|AAM18512.1|  556|Drosophila melanogaster skiff protein.     29   5.2  
AE013599-1225|AAF58707.2|  556|Drosophila melanogaster CG30021-P...    29   5.2  

>BT003746-1|AAO41407.1|  556|Drosophila melanogaster RH70415p
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LALHCKLHVACKTNRFLLFENQLQCLLFASEA 102
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


>BT003617-1|AAO39620.1|  556|Drosophila melanogaster GH12103p
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LALHCKLHVACKTNRFLLFENQLQCLLFASEA 102
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


>AF495381-1|AAM18512.1|  556|Drosophila melanogaster skiff protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LALHCKLHVACKTNRFLLFENQLQCLLFASEA 102
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


>AE013599-1225|AAF58707.2|  556|Drosophila melanogaster CG30021-PA
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LALHCKLHVACKTNRFLLFENQLQCLLFASEA 102
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,002,685
Number of Sequences: 53049
Number of extensions: 450851
Number of successful extensions: 1054
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)