Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a11
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.2  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    25   2.0  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   6.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 593 LHVELASIFVVILYRFFEIDLFA 661
           LH+ L  +FV+I+Y    ++LF+
Sbjct: 247 LHIALLVLFVIIIYAIIGLELFS 269


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -2

Query: 488 SSNYNLTRPFIVRRLYLGSRGA--RTHIRKHRPPLRLSARGHRPARGE 351
           SS  N T+  I R+    S G+  +  IRK RP LR ++   R AR E
Sbjct: 13  SSKSNFTKSAINRKRPEKSNGSTVKKTIRKRRPALRSTSGVLRAARPE 60


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -1

Query: 441 PWEPGGTNPYPEAPTTTPLVCEGSPAGEGGNSTGPEISGFA 319
           P +PG   P P A TT      G   G  GN  G   +GF+
Sbjct: 464 PLDPGNVTPTPPAYTTL-----GGTGGTMGNLFGQFGTGFS 499


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,313
Number of Sequences: 2352
Number of extensions: 16601
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)