Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a08
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    22   4.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.9  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 293 CGSDIGKSRMWARRRVCCIGSSANAC 370
           C + +  S  W +R     GS AN C
Sbjct: 17  CTAQLNFSTDWGKRSGSSAGSDANNC 42


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 684 LKEKNPDLK 710
           L+EKNPDLK
Sbjct: 86  LREKNPDLK 94


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 684 LKEKNPDLK 710
           L+EKNPDLK
Sbjct: 583 LREKNPDLK 591


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 352 PNTAHTTASPHP*FPDV 302
           P++AHT   P P  P V
Sbjct: 57  PSSAHTVLIPQPLHPSV 73


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 402 IHMEALGAKCVRVPQVEGTYGNVTLNDVK 488
           +++  +G +C   P   G Y +  +ND K
Sbjct: 45  VNLPGVGHRCQCQPGFTGKYCHENINDCK 73


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 290 SCGSDIGKSRMWARRR 337
           SC  D+G   +W R+R
Sbjct: 709 SCDCDLGWVEVWERKR 724


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,108
Number of Sequences: 336
Number of extensions: 4232
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)