Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a07
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.3  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   3.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   5.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.5  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   9.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 470 IQIDEFVINANKKKTLFQLGVHISLF 547
           +Q+DEFV+N        +   H S+F
Sbjct: 539 MQMDEFVVNLKSGSNTIERNSHESVF 564


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 731 YTYLCYNNSSQYWKTCRKIVYYKYN 657
           Y Y  YNN +  +    K +YY  N
Sbjct: 89  YNYSNYNNYNNNYNNYNKKLYYNIN 113


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 470 IQIDEFVINANKKKTLFQLGVHISLF 547
           +Q+DEFV+N        +   H S+F
Sbjct: 539 MQMDEFVVNLKSGSNTIERNSHESVF 564


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 470 IQIDEFVINANKKKTLFQLGVHISLF 547
           +Q+DEFV+N        +   H S F
Sbjct: 165 MQMDEFVVNLKSGSNTIERNSHESXF 190


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 40  IVFVPTLYIACREITTKMANF 102
           I+ +   YI+C EI+   A+F
Sbjct: 181 ILAIKVYYISCPEISVNFAHF 201


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 LLSGTFYLCFVIFIINYFAT 686
           +L  TF+   VI I +YF T
Sbjct: 4   MLRCTFFFLSVILITSYFVT 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,832
Number of Sequences: 438
Number of extensions: 4254
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)