Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt3a04
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.1  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   5.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.5  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 306 GNVCSANLGQAPARQAVIFAGLPKSTICTT 395
           GN  SAN+  A  +Q++I AG  +  I  T
Sbjct: 67  GNAASANVAVADRQQSLILAGGRRQRIMWT 96


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -1

Query: 200 SERTHRSSNC*-CNYYFVEGNFGRECCHCCK 111
           +E  ++  NC  C   F+  N    CC C K
Sbjct: 316 TEFNYKELNCQNCGRLFISNNGRVSCCRCMK 346


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 605 KFVVHICEPIKHYSIN*LHSSI*SFTSLQIKRYI*H 498
           + ++HI +P+   S N   S+   +T   IKRY+ H
Sbjct: 727 RLLLHIRDPLGGISSNKTDSTETVYTLNDIKRYLVH 762


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,928
Number of Sequences: 2352
Number of extensions: 15787
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)