Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30p24
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 32 0.32
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 32 0.32
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 32 0.32
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 32 0.32
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 32 0.32
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 32 0.32
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 32 0.32
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical ... 29 2.2
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 3.9
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 28 3.9
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 28 5.2
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 28 5.2
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 28 5.2
U41007-16|AAA82276.1| 288|Caenorhabditis elegans Hypothetical p... 28 5.2
AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical ... 28 5.2
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 28 5.2
Z75712-4|CAB00043.1| 694|Caenorhabditis elegans Hypothetical pr... 27 6.9
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 27 9.1
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 292 LLNPDIPTL-HHQTEAIPVTLHTS 360
+ NP PT H+Q +A+PVT+HTS
Sbjct: 50 VFNPTTPTFNHYQHQALPVTMHTS 73
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 129 CGDCDLCVNPCCLALSACCLIPCLCPNACG 218
C C C CC C PC C CG
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 126
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
Frame = +3
Query: 114 CFSFDCGDCDLCVNP-CCLALSACCLI--PCLCPNAC 215
C CG C C P CC CC C C C
Sbjct: 79 CCGCGCGCC--CCRPRCCCCCRRCCTCCRTCCCTRCC 113
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 129 CGDCDLCVNPCCLALSACCLIPCLCPNACG 218
C C C CC C PC C CG
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 124
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 129 CGDCDLCVNPCCLALSACCLIPCLCPNACG 218
C C C CC C PC C CG
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 125
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 129 CGDCDLCVNPCCLALSACCLIPCLCPNACG 218
C C C CC C PC C CG
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 125
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 129 CGDCDLCVNPCCLALSACCLIPCLCPNACG 218
C C C CC C PC C CG
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPCCCGCGCG 126
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 292 LLNPDIPTL-HHQTEAIPVTLHTS 360
+ NP PT H+Q +A+PVT+HTS
Sbjct: 50 VFNPTTPTFNHYQHQALPVTMHTS 73
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 292 LLNPDIPTL-HHQTEAIPVTLHTS 360
+ NP PT H+Q +A+PVT+HTS
Sbjct: 24 VFNPTTPTFNHYQHQALPVTMHTS 47
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 138 CDLCVNPCCLALSACCLIPCLCPNACG 218
C C CC C PC C CG
Sbjct: 82 CCTCCRTCCCTRCCTCCRPCCCGCGCG 108
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 138 CDLCVNPCCLALSACCLIPCLCPNACG 218
C C CC C PC C CG
Sbjct: 84 CCTCCRTCCCTRCCTCCRPCCCGCGCG 110
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 138 CDLCVNPCCLALSACCLIPCLCPNACG 218
C C CC C PC C CG
Sbjct: 87 CCTCCRTCCCTRCCTCCRPCCCGCGCG 113
>AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical
protein F18A12.5 protein.
Length = 700
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 202 HRHGIRQQALNAKQQGFTHRSQSPQSNEKQRPILLLFG 89
HR +++A+N +GF R +S ++E + I L+FG
Sbjct: 107 HRDCKKRKAVNKLVRGFLQRDESTFTSESESAIKLIFG 144
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 543 KGGDGVSRWSAAEDHRNNRSKGTECSNSNRVDTRYCN 433
+GG GV +A + R N +C NSN R CN
Sbjct: 381 RGGRGVGGGNANMEQRKNDWPCEQCGNSNFAFRRECN 417
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 144 LCVNPCCLALSACCLIPCLCPN---ACG 218
+C+ CC L+ C + C+C N ACG
Sbjct: 196 MCLAVCCCPLTCCLPLICICCNYVDACG 223
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 144 LCVNPCCLALSACCLIPCLCPNACG 218
L V+ C + C LI C+C N CG
Sbjct: 902 LLVDLGCFITNKCGLISCICLNLCG 926
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 144 LCVNPCCLALSACCLIPCLCPNACG 218
L V+ C + C LI C+C N CG
Sbjct: 875 LLVDLGCFITNKCGLISCICLNLCG 899
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 144 LCVNPCCLALSACCLIPCLCPNACG 218
L V+ C + C LI C+C N CG
Sbjct: 875 LLVDLGCFITNKCGLISCICLNLCG 899
>U41007-16|AAA82276.1| 288|Caenorhabditis elegans Hypothetical
protein C33H5.16 protein.
Length = 288
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 534 DGVSRWSAAEDHRNNRSKGTECSNSNRV 451
D + + A+DH NR K C ++NRV
Sbjct: 49 DKMQSFKKAQDHHKNRYKDVGCLDNNRV 76
>AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical
protein Y75B8A.9a protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 468 SNSNRVDTRYCNPFFRNDQWLFIGT 394
+N NRV+ R CN R QW + T
Sbjct: 505 ANGNRVEMRKCNHMERMQQWKYSST 529
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 144 LCVNPCCLALSACCLIPCLCPNACG 218
L V+ C + C LI C+C N CG
Sbjct: 875 LLVDLGCFITNKCGLISCICLNLCG 899
>Z75712-4|CAB00043.1| 694|Caenorhabditis elegans Hypothetical
protein K04G2.6 protein.
Length = 694
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 247 RPSTCTILQXXXXXXLLNPDIPTLHHQTEAIPVTLHTSNQDIQVILNRHRTDEKPLII 420
RP CT+L + TLH + +A+P + N + R D PL++
Sbjct: 604 RPPLCTVLSALLMLLPQSEAFVTLHKRLQAVPALVSIDNSPYAPKVPPCRIDFPPLML 661
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 13 VILIVKVETGAMFCYLF*NISLQL*NRITGGWVSVFHSTVG 135
V+ I T + CYLF I + + T W+S+++ T G
Sbjct: 101 VLFICVTATSDLICYLFIPIRMLIFLATTYVWISLYYHTQG 141
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical protein
T25G3.2 protein.
Length = 1322
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 210 RSDTDTESDNKRSMLNSRGLHTGHNPHSRMKNRDPSS 100
++D + +N R M+NS G+ TGH ++R S
Sbjct: 1259 KNDDERIMNNARLMINSLGVSTGHAADGYTRHRGEES 1295
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase 1
protein.
Length = 1322
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 210 RSDTDTESDNKRSMLNSRGLHTGHNPHSRMKNRDPSS 100
++D + +N R M+NS G+ TGH ++R S
Sbjct: 1259 KNDDERIMNNARLMINSLGVSTGHAADGYTRHRGEES 1295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,280,200
Number of Sequences: 27780
Number of extensions: 212099
Number of successful extensions: 721
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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