Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30p14
         (355 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   0.53 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   0.70 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   0.70 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   0.92 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   6.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   8.6  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 0.53
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 36  YEVYKWHEAG*PNNSL*LG 92
           Y+V  W + G PNN L LG
Sbjct: 270 YQVRYWLQKGAPNNKLILG 288


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 150 SNLASCFATTVLSTFNESSIPVTANY 73
           S+    + T+ +S FNESS  V  NY
Sbjct: 41  SSTIDLYNTSSVSNFNESSSSVFPNY 66


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 150 SNLASCFATTVLSTFNESSIPVTANY 73
           S+    + T+ +S FNESS  V  NY
Sbjct: 41  SSTIDLYNTSSVSNFNESSSSVFPNY 66


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 43  YINGTRLDDRIIRCDWDAGFIEG 111
           Y+    +D RII CD    FI G
Sbjct: 252 YVTRHLIDGRIIGCDQRISFIAG 274


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -2

Query: 108 FNESSIPVTANYSVIQPRAIYIPHTI 31
           F   S+P    Y    P+ +Y P  +
Sbjct: 254 FTAESLPDLTKYGAYSPKKVYAPEEV 279


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 255 NCNTLLTF*GIWVYFLCYYFSITATPTV 172
           N   +  F  +W  F   Y+ +T TP +
Sbjct: 143 NGTEVAKFKNMWTRFQLKYYQVTGTPII 170


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 255 NCNTLLTF*GIWVYFLCYYFSITATPTV 172
           N   +  F  +W  F   Y+ +T TP +
Sbjct: 143 NGTEVAKFKNMWTRFQLKYYQVTGTPII 170


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 252 CNTLLTF*GIWVYFLCYYFSITATPTVIVS 163
           CN ++ F       L YY S+  TP  + +
Sbjct: 322 CNFIILFYLSVFVILVYYASLDETPNPVTN 351


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 306 IHYDFILNSLVKFII 262
           ++Y+F+L SL+  +I
Sbjct: 179 VYYEFLLISLINILI 193


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 189 LWKNNSTENK 218
           LWK+ ST+N+
Sbjct: 194 LWKDKSTDNE 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,845
Number of Sequences: 336
Number of extensions: 1814
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)