Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30p14
(355 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p pro... 102 1e-22
AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding ... 102 1e-22
AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-P... 102 1e-22
AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p pro... 32 0.24
AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-P... 32 0.24
AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-P... 32 0.24
AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-P... 32 0.24
AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-P... 32 0.24
AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p pro... 30 0.74
AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA... 30 0.74
L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding pr... 29 1.3
AF239667-1|AAF43091.1| 356|Drosophila melanogaster putative RNA... 27 5.2
AE014298-1827|AAF48215.3| 356|Drosophila melanogaster CG4396-PA... 27 5.2
AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p pro... 27 6.9
AE014298-1946|AAO41651.1| 913|Drosophila melanogaster CG32627-P... 27 6.9
AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-P... 27 6.9
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P... 27 6.9
>AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p
protein.
Length = 154
Score = 102 bits (245), Expect = 1e-22
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVXXXXXXXXXXXX 183
EYY R +AE MR++NGTRLDDR+IR DWDAGF+EGRQYGRGKTGGQV
Sbjct: 77 EYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRDEYRTDYDAGR 136
Query: 184 XXXXKIIAQKINPNTLER 237
K+++QKI PNT R
Sbjct: 137 GGYGKLLSQKIAPNTDNR 154
>AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding
protein 20 protein.
Length = 154
Score = 102 bits (245), Expect = 1e-22
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVXXXXXXXXXXXX 183
EYY R +AE MR++NGTRLDDR+IR DWDAGF+EGRQYGRGKTGGQV
Sbjct: 77 EYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRDEYRTDYDAGR 136
Query: 184 XXXXKIIAQKINPNTLER 237
K+++QKI PNT R
Sbjct: 137 GGYGKLLSQKIAPNTDNR 154
>AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-PA
protein.
Length = 154
Score = 102 bits (245), Expect = 1e-22
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVXXXXXXXXXXXX 183
EYY R +AE MR++NGTRLDDR+IR DWDAGF+EGRQYGRGKTGGQV
Sbjct: 77 EYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRDEYRTDYDAGR 136
Query: 184 XXXXKIIAQKINPNTLER 237
K+++QKI PNT R
Sbjct: 137 GGYGKLLSQKIAPNTDNR 154
>AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p
protein.
Length = 144
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 144
E+ R DAE+ R ++GTR IR + +G R+ G G + G+
Sbjct: 53 EFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGR 99
>AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-PB,
isoform B protein.
Length = 106
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 144
E+ R DAE+ R ++GTR IR + +G R+ G G + G+
Sbjct: 53 EFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGR 99
>AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-PD,
isoform D protein.
Length = 144
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 144
E+ R DAE+ R ++GTR IR + +G R+ G G + G+
Sbjct: 53 EFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGR 99
>AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-PC,
isoform C protein.
Length = 135
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 144
E+ R DAE+ R ++GTR IR + +G R+ G G + G+
Sbjct: 53 EFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGR 99
>AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-PA,
isoform A protein.
Length = 135
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 144
E+ R DAE+ R ++GTR IR + +G R+ G G + G+
Sbjct: 53 EFEDRRDAEDATRALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGR 99
>AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p
protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.74
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAG-FIEGRQYGRGKTGG 141
E+ R DAE+ R ++GTR IR + +G EGR G G GG
Sbjct: 53 EFEDRRDAEDATRGLDGTRCCGTRIRVEMSSGRSREGRGGGGGGGGG 99
>AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA
protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.74
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAG-FIEGRQYGRGKTGG 141
E+ R DAE+ R ++GTR IR + +G EGR G G GG
Sbjct: 53 EFEDRRDAEDATRGLDGTRCCGTRIRVEMSSGRSREGRGGGGGGGGG 99
>L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding
protein protein.
Length = 135
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQ 144
E+ R DAE+ ++GTR IR + +G R+ G G + G+
Sbjct: 53 EFEDRRDAEDATAALDGTRCCGTRIRVEMSSGRSRDRRRGEGGSSGR 99
>AF239667-1|AAF43091.1| 356|Drosophila melanogaster putative RNA
binding protein protein.
Length = 356
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y EDAE + +NG RL +++I+ +
Sbjct: 92 YVRAEDAEKAVNTLNGLRLQNKVIKVSY 119
>AE014298-1827|AAF48215.3| 356|Drosophila melanogaster CG4396-PA
protein.
Length = 356
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y EDAE + +NG RL +++I+ +
Sbjct: 92 YVRAEDAEKAVNTLNGLRLQNKVIKVSY 119
>AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p
protein.
Length = 937
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 189 LWKNNSTENKPKYPRTLI 242
+WKNN++E KP PR ++
Sbjct: 397 IWKNNTSEYKPASPRYVL 414
>AE014298-1946|AAO41651.1| 913|Drosophila melanogaster CG32627-PC,
isoform C protein.
Length = 913
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 189 LWKNNSTENKPKYPRTLI 242
+WKNN++E KP PR ++
Sbjct: 109 IWKNNTSEYKPASPRYVL 126
>AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-PB,
isoform B protein.
Length = 937
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 189 LWKNNSTENKPKYPRTLI 242
+WKNN++E KP PR ++
Sbjct: 397 IWKNNTSEYKPASPRYVL 414
>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
isoform A protein.
Length = 1201
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 189 LWKNNSTENKPKYPRTLI 242
+WKNN++E KP PR ++
Sbjct: 397 IWKNNTSEYKPASPRYVL 414
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,189,046
Number of Sequences: 53049
Number of extensions: 265341
Number of successful extensions: 631
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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