Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30p14
(355 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 86 8e-18
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.23
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 29 0.71
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 1.6
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 27 2.8
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 27 2.8
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 27 2.8
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 27 2.8
AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine re... 27 2.8
AL021447-5|CAA16268.4| 312|Caenorhabditis elegans Hypothetical ... 27 3.8
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z48006-5|CAA88049.1| 251|Caenorhabditis elegans Hypothetical pr... 26 6.6
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 26 6.6
U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 26 8.7
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 26 8.7
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 26 8.7
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 26 8.7
AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical ... 26 8.7
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 26 8.7
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 85.8 bits (203), Expect = 8e-18
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVXXXXXXXXXXXX 183
EYY REDAE ++ I+ TR+DDR+IR DWDAGFIEGRQYGRGK GGQV
Sbjct: 84 EYYTREDAELALQNISNTRMDDRVIRADWDAGFIEGRQYGRGKHGGQVRDEYRKDYDPER 143
Query: 184 XXXXKIIAQK 213
+ IAQK
Sbjct: 144 GGYNRAIAQK 153
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCD 87
++ A E E ++Y NGT+LDD +IR D
Sbjct: 207 KFGAEESVEKALKY-NGTKLDDHVIRVD 233
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 29.5 bits (63), Expect = 0.71
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 4 EYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGG 141
++ +E A + +N + +I+RC W G+ RG GG
Sbjct: 296 KFETKESAARAIVQMNNADIGGQIVRCSWGKSGDSGKPSERGSGGG 341
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y REDAE + +NG L R IR +W
Sbjct: 180 YPRREDAERAIDEMNGAWLGRRTIRTNW 207
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -2
Query: 297 DFILNSLVKFIIHINCNTLLTF*GIWVYFLCYYFSITATPTVIVSSIFISNLA--SCFAT 124
+F L S+ K+ H LL I++Y L Y + +T + S F N + SCF+T
Sbjct: 351 EFSLKSIWKY--HPKPRLLLD---IFIYVLGTYVMVHSTYHSLSSKFFSENPSTRSCFST 405
Query: 123 TVLSTFNESSIPVTAN 76
S++N ++ +T++
Sbjct: 406 WFSSSYNVQNLTMTSS 421
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y RE+AE + +NG L R IR +W
Sbjct: 70 YPKREEAERAIEQMNGQWLGRRTIRTNW 97
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y RE+AE + +NG L R IR +W
Sbjct: 80 YPKREEAERAIEQMNGQWLGRRTIRTNW 107
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y RE+AE + +NG L R IR +W
Sbjct: 183 YPKREEAERAIEQMNGQWLGRRTIRTNW 210
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 7 YYAREDAENCMRYINGTRLDDRIIRCDW 90
Y RE+AE + +NG L R IR +W
Sbjct: 151 YPKREEAERAIEQMNGQWLGRRTIRTNW 178
>AF022975-6|AAB70671.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 12 protein.
Length = 293
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 207 CYYFSITATPTVIVSSIFISNLASCFATTVLS 112
C+Y T +++ + IF+S+LA CF +L+
Sbjct: 164 CFYQYWTTHKSIVFALIFLSSLALCFQLFMLN 195
>AL021447-5|CAA16268.4| 312|Caenorhabditis elegans Hypothetical
protein F19B2.3 protein.
Length = 312
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 294 FILNSLVKFIIHINCNTLLTF*GIWVYFLCYYFSITATPTVIVSSIFISNLASCFATTVL 115
F++ V IIHI CN + F ++ Y+L + P S I +SN S V+
Sbjct: 69 FLIGITVCGIIHIICNIIEFFPMLYDYYLSFKVPSECFPFAPYSKI-VSNYYSSMTNAVV 127
Query: 114 S 112
+
Sbjct: 128 T 128
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 149 LTWPPVLPRPYCRPSMNP 96
LT PPV P P C P + P
Sbjct: 253 LTHPPVAPMPRCPPPLPP 270
>Z48006-5|CAA88049.1| 251|Caenorhabditis elegans Hypothetical
protein F19C6.5 protein.
Length = 251
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -2
Query: 228 GIWVYFLCYYFSITATPTVIVSSIFISNLASCFATTVLSTFNESSI 91
G +F+ Y+ +++ ++ I+++ + +AT++L N SSI
Sbjct: 185 GFVYHFIAYFVLVSSLLIIVNKDYLIADVITTYATSLLILANISSI 230
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 149 LTWPPVLPRPYCRPSMNP 96
LT PPV P P C P + P
Sbjct: 253 LTHPPVAPMPRCPPPLPP 270
>U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical
protein F18F11.4 protein.
Length = 550
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 22 DAENCMRYINGTRLDDRIIRCDWDAGFIEG 111
D E C R GT LDDR C + EG
Sbjct: 483 DLEQCRREAFGTILDDRNQMCQQSSAGCEG 512
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 183 WRLWKNNSTENKPKYPRTLI 242
W+ WK + E KYP+++I
Sbjct: 164 WKKWKEGAHEVMQKYPKSMI 183
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 183 WRLWKNNSTENKPKYPRTLI 242
W+ WK + E KYP+++I
Sbjct: 156 WKKWKEGAHEVMQKYPKSMI 175
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 183 WRLWKNNSTENKPKYPRTLI 242
W+ WK + E KYP+++I
Sbjct: 164 WKKWKEGAHEVMQKYPKSMI 183
>AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical
protein W07E6.3 protein.
Length = 381
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 274 KIYNPY*LQ---HIINVLGYLGLFSVLLFFHNRHAHRHSQFDIHL 149
K Y P LQ HI +VL + LFS+LL A +H DI L
Sbjct: 267 KTYAPQRLQPLSHIYHVLAFTALFSILL------ARKHYMIDIVL 305
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 183 WRLWKNNSTENKPKYPRTLI 242
W+ WK + E KYP+++I
Sbjct: 164 WKKWKEGAHEVMQKYPKSMI 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,429,276
Number of Sequences: 27780
Number of extensions: 141126
Number of successful extensions: 376
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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