Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30p14
         (355 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.61 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    20   7.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   7.5  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    20   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   7.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 0.61
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 177 TVIVSSIFISNLASCFATTVLSTFNESSIPVTANYSVIQPRAIYIPHTIFGIFPRIVFL 1
           TVI + IF++ L    +T V+   N+S    T NY +       +   I G+ P I ++
Sbjct: 57  TVIYAVIFVTGLVGNVSTCVVIARNKSMHTAT-NYYLFSLAVSDLLLLISGLPPEIYYI 114


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 228 GIWVYFLCYYFSI 190
           GIWVYF+  +  I
Sbjct: 221 GIWVYFVPLFLII 233


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 22  DAENCMRYI 48
           DA+NC RY+
Sbjct: 674 DAQNCRRYL 682


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 228 GIWVYFLCYYFSI 190
           GIWVYF+  +  I
Sbjct: 97  GIWVYFVPLFLII 109


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 223 LGLFSVLLFFHNRHAHRHSQF 161
           LGL  +L F  N  +H H  F
Sbjct: 112 LGLKVILDFVPNHSSHEHPWF 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,537
Number of Sequences: 438
Number of extensions: 1741
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)