Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30p08
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...   112   3e-25
U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domai...   100   1e-21
U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    83   1e-16
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    47   1e-05
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta...    29   4.3  
U80450-2|AAK77614.1|  252|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U80450-1|AAK77613.1|  244|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory...    27   9.8  

>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score =  112 bits (269), Expect = 3e-25
 Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
 Frame = +1

Query: 307 VNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKA--LGRYYTHCICT 480
           V+  T  + PN++ I+ADDLG+ DV +  S  + TPN+  LA+      L   Y + +CT
Sbjct: 22  VDGQTATQKPNVLFIMADDLGFSDVDWKDST-LHTPNLRHLAFHKNTALLSNSYVNQLCT 80

Query: 481 PSRAALLTGKYAHRIGMQGYPLTNSEDRGLPTTEKILPQYLKELGYSTHLVGKWHVGQSR 660
           P+R+A +TG Y  R+G Q     + E  G+PT    L + +++L YST+LVGKWH+G  +
Sbjct: 81  PTRSAFMTGYYPFRVGTQNGVFLHMEPAGVPTMFPFLSENMRQLDYSTYLVGKWHLGYCK 140

Query: 661 TEYLPMQRGFD 693
            E+LP  RGFD
Sbjct: 141 KEFLPTNRGFD 151


>U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform b protein.
          Length = 452

 Score =  100 bits (239), Expect = 1e-21
 Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 352 IADDLGWDDVSFHGSDQILTPNIDLLAYSGKA--LGRYYTHCICTPSRAALLTGKYAHRI 525
           +ADDLG+ DV +  S  + TPN+  LA+      L   Y + +CTP+R+A +TG Y  R+
Sbjct: 1   MADDLGFSDVDWKDST-LHTPNLRHLAFHKNTALLSNSYVNQLCTPTRSAFMTGYYPFRV 59

Query: 526 GMQGYPLTNSEDRGLPTTEKILPQYLKELGYSTHLVGKWHVGQSRTEYLPMQRGFD 693
           G Q     + E  G+PT    L + +++L YST+LVGKWH+G  + E+LP  RGFD
Sbjct: 60  GTQNGVFLHMEPAGVPTMFPFLSENMRQLDYSTYLVGKWHLGYCKKEFLPTNRGFD 115


>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 8/130 (6%)
 Frame = +1

Query: 328 KSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKALGRYYT-HCICTPSRAALLT 504
           + PNIV+++ DDLG+ D++ +G        +D +A  G    + Y+   +C+PSRA  +T
Sbjct: 31  RHPNIVILMIDDLGYGDIASYGHPTQEYTQVDRMAAEGTRFTQAYSADSMCSPSRAGFIT 90

Query: 505 GKYAHRIGMQG--YPLTNSEDRGLPTTEKILPQYLKELGYSTHLVGKWHVGQSRTE---- 666
           G+   R+G+ G        +  GLP +E  + + L+E GY+T +VGKWH+G +       
Sbjct: 91  GRLPIRLGIVGGRRVFVPYDIGGLPKSETTMAEMLQEAGYATGMVGKWHLGINENNATDG 150

Query: 667 -YLPMQRGFD 693
            +LP +RGF+
Sbjct: 151 AHLPSKRGFE 160


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
 Frame = +1

Query: 280 ILFLILNW-IVNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKAL-G 453
           +LFLI+   + +        N++LI+ DD    D+   GS   +     ++   G     
Sbjct: 16  VLFLIIPIKVTSIHFVDSQHNVILILTDD---QDIEL-GSMDFMPKTSQIMKERGTEFTS 71

Query: 454 RYYTHCICTPSRAALLTGKYA--HRIGMQGYPLTNSEDRGLPTTEKILPQYLKELGYSTH 627
            Y T  IC PSR+ +LTG Y   H +       T  E R +   +K +  YL+E GY T 
Sbjct: 72  GYVTTPICCPSRSTILTGLYVHNHHVHTNNQNCTGVEWRKV-HEKKSIGVYLQEAGYRTA 130

Query: 628 LVGKWHVGQSRTEYLP 675
            +GK ++ +    Y+P
Sbjct: 131 YLGK-YLNEYDGSYIP 145


>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
            family protein 3 protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 265  EMYNTILFLILNWIVNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLL 429
            E Y  ++ + L+W+   S  ++SP I   +A+     D +  G +    P I L+
Sbjct: 980  EAYGKVVEMFLSWLPTYSDTEESPYIYTCLAELFDKQDAALFGPENQNLPRIFLV 1034


>U80450-2|AAK77614.1|  252|Caenorhabditis elegans Hypothetical
           protein M01E11.4b protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +1

Query: 436 SGKALGRYYTHCICTPSRAALLTGKYAHRIGMQGYPLTNSEDRGLPTTEKILPQYLKELG 615
           SG  L       +CT + AA   GKY    G +G+ +T    RGL +  +I  +Y   +G
Sbjct: 2   SGLKLVTVLLLALCTATEAAKCRGKYMEMRGREGF-VTRGGCRGLDS--QIQEEYWTTVG 58

Query: 616 YSTHL 630
           +   L
Sbjct: 59  FDGDL 63


>U80450-1|AAK77613.1|  244|Caenorhabditis elegans Hypothetical
           protein M01E11.4a protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +1

Query: 436 SGKALGRYYTHCICTPSRAALLTGKYAHRIGMQGYPLTNSEDRGLPTTEKILPQYLKELG 615
           SG  L       +CT + AA   GKY    G +G+ +T    RGL +  +I  +Y   +G
Sbjct: 2   SGLKLVTVLLLALCTATEAAKCRGKYMEMRGREGF-VTRGGCRGLDS--QIQEEYWTTVG 58

Query: 616 YSTHL 630
           +   L
Sbjct: 59  FDGDL 63


>U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory
           abnormality protein14 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -3

Query: 673 VNIQFVTVQHATFQPNESSIPTLSNIVAIFFPSSANLCLHYSLRGIPAFRFDVHIFR 503
           ++I +V +  A F PNE SI     + A+    S+    H  L G P  +  V+ FR
Sbjct: 198 IDICYVQIHDADFAPNE-SIVLYETLQALEMAKSSGKIRHIGLTGYPLGKL-VYSFR 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,707,580
Number of Sequences: 27780
Number of extensions: 363096
Number of successful extensions: 1107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)