Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30p05
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    31   0.011
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    27   0.14 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    27   0.14 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 31.1 bits (67), Expect = 0.011
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
 Frame = +1

Query: 391 CGGAIVSKQWVLTAAQCFDYVTKDEVSVRMG----SVFRDFGGRIL-SVLDVRRHPDYRV 555
           CG  I+SK++VLTAA C       ++++ +G    S   +    +L S+  V  HP Y +
Sbjct: 188 CGATIISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDI 247

Query: 556 DQY--YPEHNLAMVKVNLPIAANSRMQAVPLP 645
            +   +  +++A++K    I    ++    LP
Sbjct: 248 IEKDDWQINDIALLKTEKDIKFGDKVGPACLP 279


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 87  WPGHAGPCSSKSIVTS 134
           W G AGPC+ KS+V S
Sbjct: 614 WGGKAGPCAIKSVVPS 629


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 87  WPGHAGPCSSKSIVTS 134
           W G AGPC+ KS+V S
Sbjct: 652 WGGKAGPCAIKSVVPS 667


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 541 PDYRVDQYYPEHNLAMVKVNLPIAAN 618
           PDYR ++Y   H L + +  L   +N
Sbjct: 252 PDYRGEEYLYSHKLLLNRYYLERLSN 277


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 541 PDYRVDQYYPEHNLAMVKVNLPIAAN 618
           PDYR ++Y   H L + +  L   +N
Sbjct: 252 PDYRGEEYLYSHKLLLNRYYLERLSN 277


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 315  HHRDGPCV 338
            HHRD PCV
Sbjct: 1100 HHRDLPCV 1107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,181
Number of Sequences: 438
Number of extensions: 4995
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)