Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30p03
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 139 2e-33
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 139 2e-33
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 136 2e-32
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 136 2e-32
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 109 2e-24
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 109 2e-24
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 109 2e-24
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 92 3e-19
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 92 3e-19
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 75 7e-14
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 75 7e-14
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 75 7e-14
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 64 1e-10
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 60 2e-09
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 60 2e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 60 2e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 59 4e-09
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 57 2e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 57 2e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 56 4e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 54 8e-08
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 52 3e-07
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 52 3e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 52 6e-07
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 52 6e-07
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 52 6e-07
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 52 6e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 48 9e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 48 9e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 1e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 2e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 4e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 4e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 45 7e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 43 3e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 8e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 8e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 40 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.002
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 39 0.003
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 39 0.003
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 39 0.004
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 38 0.006
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 38 0.006
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 38 0.006
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.010
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.010
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.010
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.010
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.018
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.018
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.031
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 36 0.031
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.054
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.054
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.054
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 35 0.054
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 34 0.094
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.16
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.22
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.22
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.22
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.29
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 1.2
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 1.2
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.5
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.5
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 30 1.5
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 30 2.0
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 2.7
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 29 3.5
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 3.5
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 8.1
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 139 bits (336), Expect = 2e-33
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 441 GEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 617
E TI K V+ K AK+R K+FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 618 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 716
R+ F FI FE E+ + K+T G +E DV
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDV 182
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK +
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Query: 441 GEHTINNKKVDPKKAKARHGKIFVG 515
+ T ++ D KKA GK F G
Sbjct: 171 TKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 60.9 bits (141), Expect = 9e-10
Identities = 23/78 (29%), Positives = 50/78 (64%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 681 PKRTIGGKEVDVXACNTK 734
++TI GK V+V ++
Sbjct: 90 REQTIKGKSVEVKPAKSR 107
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 139 bits (336), Expect = 2e-33
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 441 GEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 617
E TI K V+ K AK+R K+FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 618 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 716
R+ F FI FE E+ + K+T G +E DV
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDV 182
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK +
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Query: 441 GEHTINNKKVDPKKAKARHGKIFVG 515
+ T ++ D KKA GK F G
Sbjct: 171 TKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 60.9 bits (141), Expect = 9e-10
Identities = 23/78 (29%), Positives = 50/78 (64%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 681 PKRTIGGKEVDVXACNTK 734
++TI GK V+V ++
Sbjct: 90 REQTIKGKSVEVKPAKSR 107
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 136 bits (329), Expect = 2e-32
Identities = 64/169 (37%), Positives = 101/169 (59%), Gaps = 9/169 (5%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 44 PGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVL 103
Query: 435 AAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G + +
Sbjct: 104 NNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDA 163
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXACNTK 734
+ FDK + +GF F+TF+S++V + + + I GK V+ K
Sbjct: 164 MLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +3
Query: 444 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 623
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 624 GFCFITFESEQVVNDLLKTPKRTIGGKEVD 713
GF FITF V+ +L + + GK++D
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKID 116
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 136 bits (329), Expect = 2e-32
Identities = 64/169 (37%), Positives = 101/169 (59%), Gaps = 9/169 (5%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 44 PGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVL 103
Query: 435 AAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G + +
Sbjct: 104 NNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDA 163
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXACNTK 734
+ FDK + +GF F+TF+S++V + + + I GK V+ K
Sbjct: 164 MLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +3
Query: 444 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 623
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 624 GFCFITFESEQVVNDLLKTPKRTIGGKEVD 713
GF FITF V+ +L + + GK++D
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKID 116
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 109 bits (262), Expect = 2e-24
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 441 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEV 587
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 716
E+ DK + +GF F+TF+ V+ + + G DV
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 175 KSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 109 bits (262), Expect = 2e-24
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 441 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEV 587
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 716
E+ DK + +GF F+TF+ V+ + + G DV
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 175 KSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 109 bits (262), Expect = 2e-24
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 441 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEV 587
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 716
E+ DK + +GF F+TF+ V+ + + G DV
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 175 KSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Frame = +3
Query: 306 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 485
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 486 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 632
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 633 FITFESEQVVNDLLKTPKRTIGGKEVDV 716
F+TF+ V+ + + G DV
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDV 148
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 137 KSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Frame = +3
Query: 306 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 485
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 486 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 632
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 633 FITFESEQVVNDLLKTPKRTIGGKEVDV 716
F+TF+ V+ + + G DV
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDV 148
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 137 KSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 74.5 bits (175), Expect = 7e-14
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
KLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 441 GEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFS 563
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 564 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVXAC---- 725
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V
Sbjct: 170 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 224
Query: 726 NTKTRWPR 749
N T W R
Sbjct: 225 NGSTYWKR 232
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 74.5 bits (175), Expect = 7e-14
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
KLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 441 GEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFS 563
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 564 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVXAC---- 725
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V
Sbjct: 190 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 244
Query: 726 NTKTRWPR 749
N T W R
Sbjct: 245 NGSTYWKR 252
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 74.5 bits (175), Expect = 7e-14
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
KLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 441 GEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFS 563
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 564 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVXAC---- 725
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V
Sbjct: 191 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 245
Query: 726 NTKTRWPR 749
N T W R
Sbjct: 246 NGSTYWKR 253
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 64.1 bits (149), Expect = 1e-10
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 440
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 441 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 600 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDV 716
D+ KG+ F+ FE+E+ N + K + GK+V V
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 318 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 458
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 459 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 600 DKTKNQRKGFCFITFESEQ 656
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 64.1 bits (149), Expect = 1e-10
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 440
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 441 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 600 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDV 716
D+ KG+ F+ FE+E+ N + K + GK+V V
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.5 bits (83), Expect = 0.010
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 27/166 (16%)
Frame = +3
Query: 318 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 458
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 459 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 600 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXACNTK 734
D+ + KGF F+ FE E+ + + + + + K + V K
Sbjct: 351 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 395
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAA 440
++VGGL + ++ L + G + S+N+ D T +GF F+ F E D +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 441 GEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPF 599
+ K + KA A IFVG L E+ + + + FS FG IL+V ++
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 600 DKTKNQRKGFCFITFESEQVVNDLLK 677
D KGF FI F S + + L+
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALE 160
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAA 440
++VGGL + ++ L + G + S+N+ D T +GF F+ F E D +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 441 GEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPF 599
+ K + KA A IFVG L E+ + + + FS FG IL+V ++
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 600 DKTKNQRKGFCFITFESEQVVNDLLK 677
D KGF FI F S + + L+
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALE 170
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P L V G+ ++TTD+ + +F G + +K + G S+GF F+ + +KV+
Sbjct: 172 PVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVL 230
Query: 435 AAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSEISDDEIRNFF-SEFGTILEVE 590
A +H I+ ++ D K R +IFVG L+ ++ + ++R F E + +E
Sbjct: 231 AIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA 290
Query: 591 MPFDK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 710
+ D +GF F+T S + ++ T+ G V
Sbjct: 291 VVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSV 331
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKV 431
++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ + E+ +++
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSAEAAERI 318
Query: 432 MAAGEHTINNKKVDPKKAKAR 494
++ G T+N V A+ R
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPR 339
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQRKGFCFITF 644
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQRKGFCFITF 644
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQRKGFCFITF 644
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQRKGFCFITF 644
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQRKGFCFITF 644
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQRKGFCFITF 644
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 59.3 bits (137), Expect = 3e-09
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 440
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 441 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 600 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 704
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV 431
+F+ L +K + D F +G I S V TD + G S+G+ F+ F+ S I+KV
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 432 --MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTIL 581
M + + K P+ + + + +FV + +++ FS+FG I
Sbjct: 206 NGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEIT 265
Query: 582 EVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVXACNTKTRWPR 749
+ D + + KGF F+ F + + K + G + + C + + R
Sbjct: 266 SAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSER 321
Score = 45.6 bits (103), Expect = 4e-05
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 422
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 423 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 545
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXA 722
+R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 723 CNTK 734
K
Sbjct: 418 AQRK 421
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 59.3 bits (137), Expect = 3e-09
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 440
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 441 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 600 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 704
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV 431
+F+ L +K + D F +G I S V TD + G S+G+ F+ F+ S I+KV
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 432 --MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTIL 581
M + + K P+ + + + +FV + +++ FS+FG I
Sbjct: 206 NGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEIT 265
Query: 582 EVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVXACNTKTRWPR 749
+ D + + KGF F+ F + + K + G + + C + + R
Sbjct: 266 SAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSER 321
Score = 45.6 bits (103), Expect = 4e-05
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 422
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 423 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 545
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXA 722
+R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 723 CNTK 734
K
Sbjct: 418 AQRK 421
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 441 GEHTINNKKVD 473
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 681 PKRTIGGKEVDV 716
P I G++ +V
Sbjct: 96 PNPIIDGRKANV 107
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 419
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 420 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 545
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVXA 722
+++ F FG I++ ++ T +GF ++ F + ++ + +GG+ + V
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 723 CNT 731
C T
Sbjct: 283 CVT 285
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 56.8 bits (131), Expect = 2e-08
Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 419
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 420 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 545
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVXA 722
+++ F FG I++ ++ T +GF ++ F + ++ + +GG+ + V
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 723 CNT 731
C T
Sbjct: 283 CVT 285
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 440
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 441 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 605
+ NK + P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 606 TKNQRKGFCFITFESEQVVNDLLKT 680
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 680
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 681 PKRTIGGKEVDV 716
+ GK + V
Sbjct: 435 NGTNLAGKTLQV 446
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
+++ + W T +L +F YG I+S+N+ DP+TG RGFA I F + + +K +
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 444 EHTINNKKVD 473
H I+ +VD
Sbjct: 87 PHVIDGDRVD 96
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +3
Query: 450 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 629
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 630 CFITFESEQVVNDLLKTPKRTIGGKEVDV 716
ITF+S+ N ++ I G VDV
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDV 97
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 55.6 bits (128), Expect = 4e-08
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 419
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 420 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 545
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+++ F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 437
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID---- 425
K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 426 ----KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 594 PFDKTKNQR 620
D+ R
Sbjct: 174 LRDQDGKSR 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------------ 404
KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 405 ----KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 572
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
Query: 573 TILEVEMPFDKTKNQRKGFCFITFE 647
+ EV + KG F+ ++
Sbjct: 149 ELDEVTV-LRGADGASKGCAFVKYK 172
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 52.4 bits (120), Expect = 3e-07
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 52.4 bits (120), Expect = 3e-07
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.4 bits (120), Expect = 3e-07
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAP 413
P L+VG L T+ + F G + V D G + +AF+ F +A
Sbjct: 45 PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQAL 101
Query: 414 ESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSEFGTI 578
++++K + N V+P + ++ RH +FVG LSSE+ + ++R F FG +
Sbjct: 102 QTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDV 161
Query: 579 LEVEMPFDKTKNQRKGFCFITFESEQ 656
+ ++ D + KG+ F+++ +
Sbjct: 162 SDAKVIRDTNTTKSKGYGFVSYPKRE 187
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 52.4 bits (120), Expect = 3e-07
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 611
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------------ 404
KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 405 ----KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 572
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
Query: 573 TILEVEMPFDKTKNQRKGFCFITFE 647
+ EV + KG F+ ++
Sbjct: 149 ELDEVTV-LRGADGASKGCAFVKYK 172
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 226
Query: 444 EHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 590
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 227 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 677
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 678 TPKRTI--GGKEVDV 716
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 261 KLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 350
+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 252 RLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 226
Query: 444 EHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 590
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 227 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 677
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 678 TPKRTI--GGKEVDV 716
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 261 KLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 350
+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 252 RLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 203
Query: 444 EHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 590
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 204 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 677
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 678 TPKRTI--GGKEVDV 716
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 261 KLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 350
+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 229 RLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.6 bits (118), Expect = 6e-07
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVK----------------TDPNTGRSRGFAF 395
+FVG + +K +R F +G I S+ ++ T + F
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLNDKQSSLTF 204
Query: 396 IV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 554
V F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 555 FFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 665
FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+ +A
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LAL 305
Query: 441 GEHTINNKKVDPKKAK 488
TI +K D + K
Sbjct: 306 SMETIKMEKRDLRITK 321
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/101 (27%), Positives = 54/101 (53%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
+++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV- 96
Query: 444 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 566
N + + + H + + E +DDE + + E
Sbjct: 97 -DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 51.6 bits (118), Expect = 6e-07
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 419
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 420 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 518
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 519 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 315 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 494
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 650
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 651 EQVVNDLLKTPKR 689
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 51.6 bits (118), Expect = 6e-07
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 419
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 420 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 518
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 519 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 315 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 494
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 650
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 651 EQVVNDLLKTPKR 689
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
++VG + W++T E+ +HF G++ + + D TG + FAF+ F+ ES+ +
Sbjct: 48 VYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLS 107
Query: 444 EHTINNKKV 470
N+K+
Sbjct: 108 GTMFRNRKI 116
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 51.6 bits (118), Expect = 6e-07
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 419
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 420 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 518
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 519 LSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 315 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 494
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 650
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 651 EQVVNDLLKTPKR 689
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA- 440
+FVG LS + +++ L+ F +GE+ V D T +S+G+ F+ F ++ + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 441 -----GEHTI--------NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNF 557
G+ + N+++ K KA + ++VG +S + +D ++R+
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEV 710
FS +G I EV + K QR + F+ +E ++ +++ + + G +V
Sbjct: 257 FSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/70 (25%), Positives = 44/70 (62%)
Frame = +3
Query: 447 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 626
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 627 FCFITFESEQ 656
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+++VG + + + L F G+I + + DP +G SRG+AF+ + E
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 441 GE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI----RNFFSEFGTILEVEMPFDK 605
+ H I+ K + ++F+G + S DEI + ++ +P D
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DN 319
Query: 606 TKNQRKGFCFITFESEQVVNDL 671
K + +GFCF+ F + +D+
Sbjct: 320 EKIKNRGFCFVDFIDHKTASDI 341
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVMAA 440
+FV L + TT+ E+R A + SI N+ RGFA++V + + + +
Sbjct: 595 IFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLK 651
Query: 441 GEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 584
+ + + DP+K K+FV + + +DDE++ FS+FGT+
Sbjct: 652 DRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTS 711
Query: 585 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVXACN 728
V K + KG F+ F++E + + K + +E++V N
Sbjct: 712 VRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSN 759
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
++VG + + T +E+ HF G + + ++ D +G +GFA++ F E + +A
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 444 EHTINNK--KVDPKK 482
+ + + KVDPK+
Sbjct: 140 DSLLRGRQIKVDPKR 154
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = +3
Query: 477 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 657 VVNDLLKTPKRTIGGKEVDV 716
+ + L + G+++ V
Sbjct: 131 GMQNALAMTDSLLRGRQIKV 150
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 404
+FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L V LS TT+K+LRD FG +GEI ++ D +G SRGF FI F E
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 510 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+ +A
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 86
Query: 444 EHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNF 557
+ + ++ A + + V L +I + IR+
Sbjct: 87 GQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDI 146
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
F FG I ++++ D + R GF ITF +
Sbjct: 147 FESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 459 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 638
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 639 TFESEQVV 662
F E+ V
Sbjct: 72 EFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+ +A
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 231
Query: 444 EHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNF 557
+ + ++ A + + V L +I + IR+
Sbjct: 232 GQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDI 291
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
F FG I ++++ D + R GF ITF +
Sbjct: 292 FESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 459 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 638
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 639 TFESEQVV 662
F E+ V
Sbjct: 217 EFWDEESV 224
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 677
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 678 TPKR 689
TPK+
Sbjct: 126 TPKQ 129
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/99 (25%), Positives = 53/99 (53%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P ++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI- 122
Query: 435 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 551
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 ---------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 677
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 678 TPKR 689
TPK+
Sbjct: 127 TPKQ 130
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/99 (25%), Positives = 53/99 (53%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P ++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI- 123
Query: 435 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 551
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 ---------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 404
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 674
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 675 K 677
+
Sbjct: 164 E 164
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 477 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 34.7 bits (76), Expect = 0.071
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 447 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 620
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 621 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 37.5 bits (83), Expect = 0.010
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 27/166 (16%)
Frame = +3
Query: 318 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 458
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 459 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 600 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXACNTK 734
D+ + KGF F+ FE E+ + + + + + K + V K
Sbjct: 291 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 335
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 416
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 471 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 651 EQVV-NDLLKTPKRTIGGKEVDV 716
E+ N + K + GK+V V
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFV 129
Score = 37.5 bits (83), Expect = 0.010
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 27/166 (16%)
Frame = +3
Query: 318 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 458
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 459 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 600 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXACNTK 734
D+ + KGF F+ FE E+ + + + + + K + V K
Sbjct: 288 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 332
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 404
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 404
LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 683
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 684 KRT-IGGKEVDVXACNTK 734
T + G+ V V C K
Sbjct: 117 NDTDLLGQNVKVDWCFVK 134
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
+FV + E T+ ++ D F YG+I++I++ D TG +G+A + ++ + ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 444 EHTI---NNKKVD 473
T N KVD
Sbjct: 117 NDTDLLGQNVKVD 129
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 510 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 270 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 437
V L E + ELRD FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 419
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 441 GEHTINNKK 467
T N K
Sbjct: 63 SNQTFFNSK 71
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 437
L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 647
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 276 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 455
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 456 NNKKVD 473
++ ++
Sbjct: 68 GSRYIE 73
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 516 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 695
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 696 GGKEVDV 716
G + ++V
Sbjct: 68 GSRYIEV 74
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 276 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 455
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 456 NNKKVD 473
++ ++
Sbjct: 68 GSRYIE 73
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 516 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 695
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 696 GGKEVDV 716
G + ++V
Sbjct: 68 GSRYIEV 74
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
+F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+ +
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 404
L + LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 404
L + LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMA 437
K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 438 AGEHTINNKKV 470
+ + +++
Sbjct: 66 RDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMA 437
K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 438 AGEHTINNKKV 470
+ + +++
Sbjct: 66 RDGYEFDGRRI 76
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 677
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 678 TPKRTIGGKEVDVXACNTKTR 740
+ +G + + + K R
Sbjct: 264 MDGKYVGNRPIKLRKSAWKER 284
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+++V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAA 109
Query: 441 -GEHTINNKKVDPKKAKARHGKI 506
E + + ++ ++A K+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKL 132
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
+F+G + + +T +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+++V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAA 109
Query: 441 -GEHTINNKKVDPKKAKARHGKI 506
E + + ++ ++A K+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKL 132
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 437
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 437
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 437
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 324
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 437
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 327
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 444 EHTINNKKVDPKKAKARHGKIFVGG 518
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 674
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 596
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I A
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAKTAC 74
Query: 444 EH 449
EH
Sbjct: 75 EH 76
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.041
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 264 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 431
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 432 MAAGEHTINNKKVDPKKAKARHGK 503
A E + N + K+ R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 428
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 428
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 428
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/138 (23%), Positives = 58/138 (42%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+LFVG L E + EL++ F +G+I + +GFAF+ + A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEA 169
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 620
+ I + + + I V LS +S++ + + FS FG + D+ K +
Sbjct: 170 IDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRP 228
Query: 621 KGFCFITFESEQVVNDLL 674
G + FE + N+ +
Sbjct: 229 TGEGIVEFERKPNCNEAM 246
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 474 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 654 QVVNDLLKT-PKRTIGGKEVDV 716
+ R I G++V V
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/138 (23%), Positives = 58/138 (42%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+LFVG L E + EL++ F +G+I + +GFAF+ + A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEA 169
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 620
+ I + + + I V LS +S++ + + FS FG + D+ K +
Sbjct: 170 IDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRP 228
Query: 621 KGFCFITFESEQVVNDLL 674
G + FE + N+ +
Sbjct: 229 TGEGIVEFERKPNCNEAM 246
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 474 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 654 QVVNDLLKT-PKRTIGGKEVDV 716
+ R I G++V V
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRV 182
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.1 bits (77), Expect = 0.054
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYG 332
K+FVGG+ W+ T+ L+D FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 596
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 681 PK-RTIGGKEV 710
+ +GG+ V
Sbjct: 56 LNGKELGGERV 66
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGG 518
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 681 PK-RTIGGKEV 710
+ +GG+ V
Sbjct: 56 LNGKELGGERV 66
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGG 518
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 681 PK-RTIGGKEV 710
+ +GG+ V
Sbjct: 56 LNGKELGGERV 66
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 261 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGG 518
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 264 LFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+F+GG+ T ++L R G YG++ + + DP +G A + F ++ + ++
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISG 426
Query: 441 G----EHTINNKKVDPK 479
H NNK+V+ K
Sbjct: 427 RFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 429 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 581
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +3
Query: 264 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 413
+F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 474 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 584
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 662
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 663 N 665
N
Sbjct: 67 N 67
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 681 PKRTIGGKEV 710
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 617
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 618 RKGFCFIT 641
GFC T
Sbjct: 88 GFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 617
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 618 RKGFCFIT 641
GFC T
Sbjct: 88 GFGFCHFT 95
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P +L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRAR 156
Query: 435 AA-GEHTINNKKVDPKKAKAR-HGK 503
A TI ++V+ A R H K
Sbjct: 157 AEFNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P +L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRAR 156
Query: 435 AA-GEHTINNKKVDPKKAKAR-HGK 503
A TI ++V+ A R H K
Sbjct: 157 AEFNGTTIEGRRVEVNLATQRVHNK 181
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 537 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 659
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 605
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 294 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
T KEL+ +FGAYG+I + +D + G F I F S+D ++
Sbjct: 44 TSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDVLL 88
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 688 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 575
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 327 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 506
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 507 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 656
++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +3
Query: 261 KLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 407
+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 18 QVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 267 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 434
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 P*KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 434
P +LF+ L + +L++ F + +I+ ++ PN S+ AFI F E
Sbjct: 637 PLQLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVEDAQAAF 693
Query: 435 AAGEH-TINNKKVDPKKAKARHGKIFV 512
A +NN VD A+ + K+ V
Sbjct: 694 AKSNGLKVNNHLVDVFYARHQETKVDV 720
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 270 VGGLSWETTDKELRDHFGAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPESI 422
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Frame = +3
Query: 261 KLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFIVFK 407
K+++GG++ E + E++ F YGEIE + V PN FAFI +
Sbjct: 327 KIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFITMR 386
Query: 408 APESIDKVMAA 440
+ + A
Sbjct: 387 NKAGVKAIFEA 397
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRCE 220
N++N + + +N NG NGG + N E+ G D + E
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEEE 1365
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRCE 220
N++N + + +N NG NGG + N E+ G D + E
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEEE 1365
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTI-LEVEMPFDKTKNQRKGFCFITF----ESEQVVND 668
+++G + ++ +++ + F+E G +V+ + K++ KG+CFI F E+ Q + D
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVY--VKDELKGYCFIEFITFDEARQTLYD 127
Query: 669 LLKTPKRTIGGKEVDVXAC 725
L R G K++ C
Sbjct: 128 L--NGNRIPGFKDIRFNLC 144
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 378 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 497
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,214,435
Number of Sequences: 27780
Number of extensions: 343732
Number of successful extensions: 1288
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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