Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30o22
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069483-1|AAL39628.1|  706|Drosophila melanogaster LD21733p pro...   108   6e-24
AE014297-831|AAF54299.2|  706|Drosophila melanogaster CG8379-PA,...   108   6e-24
AE014297-830|AAS65128.1|  707|Drosophila melanogaster CG8379-PB,...   105   4e-23
AE014296-636|AAF47758.2|  296|Drosophila melanogaster CG12077-PA...    29   4.4  

>AY069483-1|AAL39628.1|  706|Drosophila melanogaster LD21733p
           protein.
          Length = 706

 Score =  108 bits (260), Expect = 6e-24
 Identities = 60/140 (42%), Positives = 82/140 (58%)
 Frame = +2

Query: 206 MAMRKRSGSGSKRHLKEKVVXIYESFFRGEDLTTDNPTFWDEFFLLKPKIPQLEAEIHKL 385
           M  RKRSGSGS +  KEKVV IYE   RGED ++++P FW+EFFLL+P    LE EI KL
Sbjct: 1   MTSRKRSGSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNFEALENEIGKL 60

Query: 386 STEQLINMKESMNILVEQCIEMLRQDHHIRXXXXXXXXXXXXITMYQRLEQDSNINIKTI 565
           + EQL  +K ++N L ++CIEML  DH  R              ++++   +  +NI   
Sbjct: 61  NNEQLQLVKPNLNTLFQRCIEMLDTDHPKRLCNSLHTLCSLFYGIFKKSNAEPTLNILNE 120

Query: 566 MIGQENADTKMVKLFEPMQY 625
           + G E  D + +KL   MQY
Sbjct: 121 IFGHEKMD-EWLKLL--MQY 137


>AE014297-831|AAF54299.2|  706|Drosophila melanogaster CG8379-PA,
           isoform A protein.
          Length = 706

 Score =  108 bits (260), Expect = 6e-24
 Identities = 60/140 (42%), Positives = 82/140 (58%)
 Frame = +2

Query: 206 MAMRKRSGSGSKRHLKEKVVXIYESFFRGEDLTTDNPTFWDEFFLLKPKIPQLEAEIHKL 385
           M  RKRSGSGS +  KEKVV IYE   RGED ++++P FW+EFFLL+P    LE EI KL
Sbjct: 1   MTSRKRSGSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNFEALENEIGKL 60

Query: 386 STEQLINMKESMNILVEQCIEMLRQDHHIRXXXXXXXXXXXXITMYQRLEQDSNINIKTI 565
           + EQL  +K ++N L ++CIEML  DH  R              ++++   +  +NI   
Sbjct: 61  NNEQLQLVKPNLNTLFQRCIEMLDTDHPKRLCNSLHTLCSLFYGIFKKSNAEPTLNILNE 120

Query: 566 MIGQENADTKMVKLFEPMQY 625
           + G E  D + +KL   MQY
Sbjct: 121 IFGHEKMD-EWLKLL--MQY 137


>AE014297-830|AAS65128.1|  707|Drosophila melanogaster CG8379-PB,
           isoform B protein.
          Length = 707

 Score =  105 bits (253), Expect = 4e-23
 Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
 Frame = +2

Query: 206 MAMRKRSGSGSKRHLKEKVVXIYESFFRGEDLTTDNPTFWDEFFLLKPKIPQLEAEIHKL 385
           M  RKRSGSGS +  KEKVV IYE   RGED ++++P FW+EFFLL+P    LE EI KL
Sbjct: 1   MTSRKRSGSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNFEALENEIGKL 60

Query: 386 STEQLINMKESMNILVEQCIEML-RQDHHIRXXXXXXXXXXXXITMYQRLEQDSNINIKT 562
           + EQL  +K ++N L ++CIEML  +DH  R              ++++   +  +NI  
Sbjct: 61  NNEQLQLVKPNLNTLFQRCIEMLDTEDHPKRLCNSLHTLCSLFYGIFKKSNAEPTLNILN 120

Query: 563 IMIGQENADTKMVKLFEPMQY 625
            + G E  D + +KL   MQY
Sbjct: 121 EIFGHEKMD-EWLKLL--MQY 138


>AE014296-636|AAF47758.2|  296|Drosophila melanogaster CG12077-PA
           protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -1

Query: 456 LNISIHCSTNIFILSFMFISCSVDSLCISASSCGIFG 346
           LN  I C T   IL  + +S SV    I   SCGI G
Sbjct: 56  LNNQISCITGFLILYQLMLSDSVSPTTILVPSCGITG 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,651,838
Number of Sequences: 53049
Number of extensions: 452581
Number of successful extensions: 1133
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)