Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30o20
(1006 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 26 0.62
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 26 0.62
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 26 0.62
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 26 0.62
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 26 0.62
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 5.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 7.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 7.6
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 7.6
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHRYLIINY 771
NY YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 7.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 634 NWIIYNHSRCCNNSFGTYRYLIINY 560
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHRYLIINY 771
NY YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 7.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 634 NWIIYNHSRCCNNSFGTYRYLIINY 560
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHRYLIINY 771
NY YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 7.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 634 NWIIYNHSRCCNNSFGTYRYLIINY 560
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHRYLIINY 771
NY YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 7.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 634 NWIIYNHSRCCNNSFGTYRYLIINY 560
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 25.8 bits (54), Expect = 0.62
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 634 NWIIYNHSRCCNNSFGTYRYLIINYFGSAYSSWRLNYI 521
N I+N++ NN++ Y Y NY + +NYI
Sbjct: 87 NKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYI 124
Score = 23.0 bits (47), Expect = 4.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHRYLIINY 771
N I+NN+ NN++ + Y NY
Sbjct: 87 NKTIHNNNNYNNNNYNNYNYNNNNY 111
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 5.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 407 KLINEEPKGTINDEVTPAVNEV 472
K+I +PKG+I D + + NEV
Sbjct: 235 KIIAVDPKGSILDPSSDSQNEV 256
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHRYLIINY 771
NY YNN N++ Y INY
Sbjct: 90 NYSNYNNYNNNYNNYNKKLYYNINY 114
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.6
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 845 NYIIYNNSRXCNNSFGTHR--YLIINY 771
N I+NN+ NN++ ++ Y INY
Sbjct: 87 NKTIHNNNNYNNNNYNNYKKLYYNINY 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 7.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 407 KLINEEPKGTINDEVTPAVNEVSSGPSTIVAAPAVVVNDVIESPT 541
K+I E+ K N +TPAVN + G VA + D+ ++ T
Sbjct: 462 KIIEEKRKNK-NKNLTPAVNIIVKGD---VAGSVEALLDIFDTYT 502
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,257
Number of Sequences: 438
Number of extensions: 4952
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33379164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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