Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30o14
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.57 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   4.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   4.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.1  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = +2

Query: 332 RLHVPAGLATADTFRATLVHGANHLHVQLRLHAGLRCYTVRIERRTFLAGGE 487
           R+H        D       H    LH  +R+H G R +   +  +TF+  G+
Sbjct: 140 RIHTKERPYKCDVCERAFEHSGK-LHRHMRIHTGERPHKCTVCSKTFIQSGQ 190


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 548 GVQAAGGMAGPRNSVLLLFNVQFRGSFI 631
           G  + GG  GPRN +L L    + G F+
Sbjct: 143 GDGSPGGNGGPRNGLLPLLVWIYGGGFM 170


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 548 GVQAAGGMAGPRNSVLLLFNVQFRGSFI 631
           G  + GG  GPRN +L L    + G F+
Sbjct: 143 GDGSPGGNGGPRNGLLPLLVWIYGGGFM 170


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 417 FVYMLGCAAIPFVLSAELFLPEVR 488
           F +ML     PF+LS  L  P++R
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIR 254


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 417 FVYMLGCAAIPFVLSAELFLPEVR 488
           F +ML     PF+LS  L  P++R
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIR 254


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 6   EEAKDLAKHEEQQVEQKPTSSWKFLMKSKSSQ 101
           E  K +A H + Q    PT  WK    SKS +
Sbjct: 722 ERNKHVALHCQAQGVPTPTIVWKKATGSKSGE 753


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 6   EEAKDLAKHEEQQVEQKPTSSWKFLMKSKSSQ 101
           E  K +A H + Q    PT  WK    SKS +
Sbjct: 718 ERNKHVALHCQAQGVPTPTIVWKKATGSKSGE 749


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 116 SANNHDPDHIN 148
           SAN HDPD+ +
Sbjct: 236 SANGHDPDYFD 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,989
Number of Sequences: 438
Number of extensions: 4816
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)