Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30o12
(286 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41515-1|AAA91179.1| 70|Homo sapiens DSS1 protein. 69 3e-12
CR456887-1|CAG33168.1| 70|Homo sapiens SHFM1 protein. 69 3e-12
BC032782-1|AAH32782.1| 70|Homo sapiens split hand/foot malform... 69 3e-12
AC073230-1|AAQ93368.1| 70|Homo sapiens unknown protein. 69 3e-12
U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation in... 30 1.6
U05237-1|AAA97522.1| 810|Homo sapiens FAC1 protein. 28 6.3
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 28 6.3
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 28 6.3
BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1... 27 8.3
BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1... 27 8.3
BC006364-1|AAH06364.1| 750|Homo sapiens TBCD protein protein. 27 8.3
AK056430-1|BAB71181.1| 658|Homo sapiens protein ( Homo sapiens ... 27 8.3
AC074378-1|AAY41024.1| 658|Homo sapiens unknown protein. 27 8.3
>U41515-1|AAA91179.1| 70|Homo sapiens DSS1 protein.
Length = 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1
Query: 34 KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 210
KQ VDLG PAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>CR456887-1|CAG33168.1| 70|Homo sapiens SHFM1 protein.
Length = 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1
Query: 34 KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 210
KQ VDLG PAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>BC032782-1|AAH32782.1| 70|Homo sapiens split hand/foot
malformation (ectrodactyly) type 1 protein.
Length = 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1
Query: 34 KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 210
KQ VDLG PAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>AC073230-1|AAQ93368.1| 70|Homo sapiens unknown protein.
Length = 70
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1
Query: 34 KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 210
KQ VDLG PAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation
initiation factor eIF3, p35 subunit protein.
Length = 258
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 94 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 225
+ WG ED +DEDV +DNW+DD + +++ ++ K+ ++K
Sbjct: 37 DRWGGED-EDEDV---KDNWDDDDDEKKEEAEVKPEV-KISEKK 75
>U05237-1|AAA97522.1| 810|Homo sapiens FAC1 protein.
Length = 810
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 109 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 228
ED D E+ ED+ ED++ +DD + +++E D S
Sbjct: 9 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDAS 48
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 109 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 228
ED D E+ ED+ ED++ +DD + +++E D S
Sbjct: 9 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDAS 48
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 109 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 228
ED D E+ ED+ ED++ +DD + +++E D S
Sbjct: 9 EDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDAS 48
>BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1
protein.
Length = 709
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 94 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 225
E G E+ +ED V ED ED+ + +D ++ ++ E+ ++++
Sbjct: 201 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
>BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1
protein.
Length = 727
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 94 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 225
E G E+ +ED V ED ED+ + +D ++ ++ E+ ++++
Sbjct: 201 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
>BC006364-1|AAH06364.1| 750|Homo sapiens TBCD protein protein.
Length = 750
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 160 RLPSCLPKPIHLHHQRLLYPNFPR 89
RLPS P P H + YP+FPR
Sbjct: 722 RLPSERPAPAGSHRFKSSYPHFPR 745
>AK056430-1|BAB71181.1| 658|Homo sapiens protein ( Homo sapiens
cDNA FLJ31868 fis, clone NT2RP7001962, highly similar to
Rattus norvegicus YT521 mRNA for RNA splicing-related
protein. ).
Length = 658
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 94 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 225
E G E+ +ED V ED ED+ + +D ++ ++ E+ ++++
Sbjct: 150 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 193
>AC074378-1|AAY41024.1| 658|Homo sapiens unknown protein.
Length = 658
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 94 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 225
E G E+ +ED V ED ED+ + +D ++ ++ E+ ++++
Sbjct: 150 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,579,453
Number of Sequences: 237096
Number of extensions: 498972
Number of successful extensions: 1657
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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