Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30o08
(723 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 40 0.002
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 34 0.10
SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13) 34 0.13
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.23
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 32 0.54
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_5983| Best HMM Match : MIF4G (HMM E-Value=1.6) 31 0.95
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 29 2.9
SB_15403| Best HMM Match : CH (HMM E-Value=0) 29 2.9
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 29 3.8
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 5.0
SB_51028| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_1875| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 8.8
SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Frame = +1
Query: 124 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACC---------PACVTLLGEGATCK 273
VCG+D +N C L CPKN +H G CA C CVT L + A C
Sbjct: 1157 VCGSDKVSYRNKCYMIALNCPKNKYVYVKHEGYCAPCRLAECHKVYAKCVTTLYQTARCV 1216
Query: 274 IYS-KELGETPSAVCKEPLKCIKRVC 348
+ +E AVC +K + C
Sbjct: 1217 CPTLQECAARKGAVCASDMKTYQSEC 1242
Score = 34.7 bits (76), Expect = 0.077
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 118 ALVCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELG 294
A VCGTD + CI C R +HAG+C C V G C + G
Sbjct: 372 APVCGTDDRTYPSECIMKTSACADKKAVRVKHAGECGPCGTLVCT--NGKNC--VTSHQG 427
Query: 295 ETPSAVCKEP 324
T AVC P
Sbjct: 428 LTRQAVCACP 437
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 124 VCGTDYCEK-NPCIQPPLVCPKNTEHRARHAGKCACC 231
VCGTD N C+ C K H G C C
Sbjct: 229 VCGTDKSSYLNECVMKARACRKEKSVTVAHRGFCGAC 265
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 124 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCKIYSKELGE 297
VCG+D NPC+ C N +H GKC +C +G CK+ +G
Sbjct: 37 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM----IGN 92
Query: 298 TPSAVCKEPLKCIKRVC 348
P + C K C
Sbjct: 93 KPRCMRPPQTACSKVRC 109
>SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 101 RQQRTVLWYVVQTTVKKIHAYSHHLFALRTLSIAPD 208
R +R VLW V + ++ + A+S+ LF+L + + PD
Sbjct: 171 RSERRVLWDVASSKIRAVTAFSNSLFSLNSNAFCPD 206
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +1
Query: 175 VCPKNTEHRARHAGKCACCPACVTLLG-EGAT-------CKIYSKELGETPSAVCKEPLK 330
+CP NT KC CPA ++ G +GAT CK Y E ++ +K
Sbjct: 2764 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSKDQCRECKDYEPEDKYGDCTTWRQQMK 2823
Query: 331 CIK 339
C+K
Sbjct: 2824 CVK 2826
>SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13)
Length = 340
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +1
Query: 175 VCPKNTEHRARHAGKCACCPACVTLLG-EGAT-------CKIYSKELGETPSAVCKEPLK 330
+CP NT KC CPA ++ G +GAT CK Y E ++ +K
Sbjct: 65 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSKDQCRECKDYEPEDKYGDCTTWRQQMK 124
Query: 331 CIK 339
C+K
Sbjct: 125 CVK 127
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = +1
Query: 124 VCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCA-----CCPAC 240
VCG+D NPC+ VC N + R +H G C C P C
Sbjct: 129 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 173
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +1
Query: 124 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCKIYSKE--L 291
VCG+D NPC+ C N +H GKC +C +G CK+ +
Sbjct: 180 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKMIGNKPRC 239
Query: 292 GETPSAVCKEPLKC 333
P C E ++C
Sbjct: 240 MRPPQTDCSE-VRC 252
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 124 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGET 300
VCG+D N C+ C NT R G C C +TCK +
Sbjct: 1217 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCDPCSNVTCDSPPYSTCKAQD----DQ 1272
Query: 301 PSAVCKEPL-KCIKRV 345
P+ VC EP K +K V
Sbjct: 1273 PTCVCVEPCPKTLKPV 1288
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 121 LVCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACC 231
LVCGTD N C+ C N+ + + G C C
Sbjct: 1519 LVCGTDNITYSNECLMKYQACRTNSALKVKRKGDCDVC 1556
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 160 IQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKC 333
++P L CPK T A C+ CP + G GA ++ S+ C+ +C
Sbjct: 390 VEPCLPCPKGTYQTAIGQMSCSECPGTKSTHGPGADSHDMCLDIDNCASSPCQNGGRC 447
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = +1
Query: 127 CGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPS 306
C + C KN PP+VCPK+ E CC C SK + + P
Sbjct: 1785 CPSTCCIKN---SPPVVCPKSCETTCTPDCPVMCCKNSSPATECPTICA--SKCISKCPE 1839
Query: 307 AVCKEP 324
CK+P
Sbjct: 1840 KCCKQP 1845
>SB_5983| Best HMM Match : MIF4G (HMM E-Value=1.6)
Length = 410
Score = 31.1 bits (67), Expect = 0.95
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 86 WWHALRQQRTVLWYVVQTTVKKIHAYSHH 172
W HA R +VLW+++++ +KK++ + H
Sbjct: 135 WSHARRNFGSVLWWLLESRIKKVNKANRH 163
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +1
Query: 91 ACVASAAYGALVCGTDYCEKNPCIQPPLVCPKNT-EHRARHAGKCACC---PACVTLLGE 258
+CV +A +G C C P+ C T + R+ CA PAC T LGE
Sbjct: 314 SCVCAAGWGGSTCSLPEC--------PITCTSGTCDLTVRYCSGCAAGFTGPACNTSLGE 365
Query: 259 G 261
G
Sbjct: 366 G 366
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 124 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKC 222
VCG+D NPC+ C N +H GKC
Sbjct: 51 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKC 84
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Frame = +1
Query: 124 VCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGET 300
+CGTD N C + T H G C P+C L CK YS +
Sbjct: 1246 ICGTDGKTYNNDKDLESAACAQQTSIVRWHKGPCTVEPSCANL-----QCKYYSYCIVRD 1300
Query: 301 PSAV--CKEPLKC--IK-RVC 348
AV C +P C +K RVC
Sbjct: 1301 GGAVCTCPDPAACPLVKSRVC 1321
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCP 234
VCG+D N C+ C NT R G C CP
Sbjct: 10 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCEPCP 47
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCP 234
VCGTD N C+ C N R G C CP
Sbjct: 172 VCGTDNNTYDNECLMRQQACVANATVAVRRKGHCEPCP 209
>SB_51028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/68 (22%), Positives = 27/68 (39%)
Frame = +1
Query: 295 ETPSAVCKEPLKCIKRVCTKLV*SFSLAGKYKLAILLSRPVRNIICVRNKIDNNMHCSKY 474
E + ++ LK + VC K + G + L ++ V + N+H + Y
Sbjct: 246 EKKKTIFRDLLKLLDEVCKKAKCHVLIGGDFNLKYAIAETVVTEVVQERSNQYNLHTNGY 305
Query: 475 RNLKLKNM 498
+N K M
Sbjct: 306 QNKPRKKM 313
>SB_1875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 437 RTQIIFRTGRDRSIASLYFPANENDYTSLVQTLLMHLRG-SLHTAEGVSPSSFE*ILQVA 261
RT IFR RD+ + +L+F NE T L+M L +G+S S +L
Sbjct: 143 RTTAIFRHARDKHV-TLFFFINEKLNTQHKTILIMKSPDPRLKYIDGMSQSEMRLVLVKY 201
Query: 260 PSPS 249
P PS
Sbjct: 202 PLPS 205
>SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 850
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 130 GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATC 270
GT E C L CP+ T R A C+ CP E +C
Sbjct: 506 GTMQSESVACCWECLQCPEGTVTSIRGATNCSTCPVTQKSNRERTSC 552
>SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 460 HCSKYRNLKLKNMN 501
HCSKYRN+K K +N
Sbjct: 264 HCSKYRNIKQKYIN 277
>SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 277 KSCKLHLHQVKLH-KRDNKHTFQRVWRDAQCS 185
K+ K H+ VK H KR N TF ++ QC+
Sbjct: 27 KTVKFHVFSVKFHEKRSNSTTFGQIPPSRQCT 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,635,040
Number of Sequences: 59808
Number of extensions: 460720
Number of successful extensions: 1132
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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