Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30n18
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 54 2e-08
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 50 4e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 44 2e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 44 3e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 3e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 40 5e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 40 5e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 39 7e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 39 7e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 36 0.005
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 30 0.30
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 30 0.30
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 30 0.30
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 30 0.40
SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|ch... 29 0.53
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 29 0.70
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 28 1.6
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 2.1
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 27 2.8
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 2.8
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 3.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 54.4 bits (125), Expect = 2e-08
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = +2
Query: 416 FNFLSALRRHEKQHSRKGSVQC--NKCGGKFRDEVLLKRHFN-YAHKGTFICEECGAS-- 580
FN LS + S K C +CG K+ LL++H ++++ F+C+ G S
Sbjct: 4 FNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKA 63
Query: 581 FSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFCS 745
F K L+ H + H + + + C +GC F HL+ H H+ KP+ C+
Sbjct: 64 FYRKSHLKIHKRCHT--NVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACT 116
Score = 54.4 bits (125), Expect = 2e-08
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 13/152 (8%)
Frame = +2
Query: 326 CNKQFKYESERKRHEQS---HSLHFQC--QICSKKFNFLSALRRH-EKQHSRKGSVQC-- 481
C++ F + + H + H L + C Q C +F L+ H + H + S C
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Query: 482 NKCGGK--FRDEVLLKRHFNYAHKGTFICEECGASFSSKPALRTHLKIHRPESERR--YK 649
C G F L+ H AH + C CG F + LR H+ +H+ E R Y
Sbjct: 180 ESCVGHEGFEKWSQLQNHIREAHVPS--CSICGRQFKTAAHLRHHVVLHQTTLEERKTYH 237
Query: 650 CSVNGCRKTFNFPHHLKHH-ELTHKNEKPHFC 742
C + GC+K+F LK H + H+ C
Sbjct: 238 CPMEGCKKSFTRSSALKKHISVIHEGNMAFHC 269
Score = 50.8 bits (116), Expect = 2e-07
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Frame = +2
Query: 323 LCN-KQFKYESERKRHEQSHSL-HFQCQICSKKFNFLSALRRHEKQHSRKGSVQCN--KC 490
+C+ + E E K + + H + C KK++ S L +H + HS + C+ C
Sbjct: 1 MCHFNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGC 60
Query: 491 GGKFRDEVLLKRHFN-YAHKGTFIC--EECGASFSSKPALRTHLKIHRPESERRYKCSVN 661
F + LK H + + F C + C A F ++ L H+++HR + Y C+
Sbjct: 61 SKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHR--KPKPYACTWE 118
Query: 662 GCRKTFNFPHHLKHH-ELTHKNEKPHFCS 745
GC + F+ L+ H H + P+ C+
Sbjct: 119 GCDECFSKHQQLRSHISACHTHLLPYPCT 147
Score = 47.6 bits (108), Expect = 2e-06
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +2
Query: 395 CQICSKKFNFLSALRRHEKQHS----RKGSVQC--NKCGGKFRDEVLLKRHFNYAHKGT- 553
C IC ++F + LR H H + + C C F LK+H + H+G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 554 -FICEECGASFSSKPALRTHLKIHRPESERRYKCSVNGC 667
F C+ CG F K L+ HL+ R ++ +K +N C
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLE--RGTCKKAHKPYINEC 302
Score = 46.0 bits (104), Expect = 6e-06
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 14/112 (12%)
Frame = +2
Query: 317 CSLCNKQFKYESERKRH--------EQSHSLHFQCQICSKKFNFLSALRRH-EKQHSRKG 469
CS+C +QFK + + H E+ + H + C K F SAL++H H
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 470 SVQCNKCGGKFRDEVLLKRHF-----NYAHKGTFICEECGASFSSKPALRTH 610
+ C+ CG KF + +L+RH AHK +I ECG + H
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLERGTCKKAHK-PYI-NECGIKHDGIEGVAIH 315
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 50.0 bits (114), Expect = 4e-07
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +2
Query: 269 STTLAMTAEDSTNKLQCSL--CNKQFKYESERKRHEQSHSLH--FQCQICSKKFNFLSAL 436
S++ A + S C+ CNK+F K H +H+ + FQC IC K F
Sbjct: 556 SSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDK 615
Query: 437 RRHEKQHSRKGSVQCNKCGGKFRDEVLLKRHF 532
RRHE+ H+ + C C +F L RH+
Sbjct: 616 RRHEQLHTGIKAFACVTCNQRFARMDALNRHY 647
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 284 MTAEDSTNKLQCSLCNKQFKYESERKRHEQSHS--LHFQCQICSKKFNFLSALRRHEK 451
M + QCS+C K F + +++RHEQ H+ F C C+++F + AL RH K
Sbjct: 591 MNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 41.5 bits (93), Expect = 1e-04
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +2
Query: 329 NKQFKYESERKRHEQSHSLHFQCQI--CSKKFNFLSALRRHEKQHSRKGSVQCNKCGGKF 502
NK S + + E ++ C C+K+F L+ H H+ QC+ C F
Sbjct: 550 NKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSF 609
Query: 503 RDEVLLKRHFNYAHKG--TFICEECGASFSSKPALRTHLK 616
+ +RH H G F C C F+ AL H K
Sbjct: 610 ARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 38.7 bits (86), Expect = 9e-04
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 629 ESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFCS 745
+S+ Y C+ GC K F ++LK H TH N +P CS
Sbjct: 565 KSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCS 603
Score = 37.1 bits (82), Expect = 0.003
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 407 SKKFNFLSALRRHEKQHSRKGSVQCNKCGGKFRDEVLLKRHFNYAHKGTFICE--ECGAS 580
SK ++LS + S V G K + K +G ++C C
Sbjct: 526 SKSNDYLSVRNTRPRSRSLNSLV-----GNKSENSSSSKAKSESKSQGNYVCTFAGCNKR 580
Query: 581 FSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFC 742
F+ L++H+ H + R ++CS+ C+K+F H + HE H K C
Sbjct: 581 FTRAYNLKSHMNTHT--NYRPFQCSI--CKKSFARQHDKRRHEQLHTGIKAFAC 630
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +2
Query: 578 SFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFCS 745
SF+ KP L+ + HR R Y C+ C K+F HL+ HE TH+N K CS
Sbjct: 6 SFTEKP-LKKRSRAHRLGDPRFY-CTYPDCPKSFTRKEHLRRHERTHENVKAFSCS 59
Score = 39.9 bits (89), Expect = 4e-04
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 323 LCNKQFKYESERKRHEQSHSL---HFQCQI--CSKKFNFLSALRRHEKQHSRKGSVQCNK 487
+ N++ E K+ ++H L F C C K F LRRHE+ H + C+
Sbjct: 1 MSNEESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSF 60
Query: 488 CGGKFRDEVLLKRHFNYAH 544
C F +L RH H
Sbjct: 61 CNRAFARSDVLNRHVQQMH 79
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 296 DSTNKLQCSLCNKQFKYESERKRHEQSHSLHFQCQICSKK 415
++ CS CN+ F RH Q +H Q Q S++
Sbjct: 51 ENVKAFSCSFCNRAFARSDVLNRHVQ--QMHLQKQNLSER 88
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 389 FQCQICSKKFNFLSALRRHEKQHSRKGSVQCNKCGGKFRDEVLLKRHFNYAHKGTFICEE 568
F C C+K+F L RH+ HS+ + C C K + + LLKRH H + EE
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIEE 90
Score = 30.7 bits (66), Expect = 0.23
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 296 DSTNKLQCSLCNKQFKYESERKRHEQSHSL--HFQCQICSKKFNFLSALRRH-EKQHSRK 466
DS C C K+F RH+ HS C C K L+RH ++ H+ K
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Query: 467 GSVQ 478
++
Sbjct: 86 SVIE 89
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 347 ESERKRHEQSHSLHFQC--QICSKKFNFLSALRRHEKQHSRKGSVQCNKCGGKFRDEVLL 520
++++ R Q + ++C Q C+K F RRH + H+ + C C F +L
Sbjct: 3 KAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVL 62
Query: 521 KRHFNYAH 544
RH N H
Sbjct: 63 NRHVNQKH 70
Score = 39.9 bits (89), Expect = 4e-04
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 629 ESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFC 742
E + RYKC GC K+F H + H +H N K C
Sbjct: 12 EGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFIC 49
Score = 32.7 bits (71), Expect = 0.057
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 326 CNKQFKYESERKRHEQSH--SLHFQCQICSKKFNFLSALRRHEKQ 454
C K F + +RH +SH S F C CS F L RH Q
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQ 68
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 548 GTFIC--EECGASFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHK 721
G ++C C + K + +H++ H S+R Y+C + C+ F H LK H H+
Sbjct: 441 GKYVCLYNGCNKRIARKYNVESHIQTHL--SDRPYRCDL--CKAGFVRHHDLKRHLRIHE 496
Query: 722 NEKPHFC 742
N +P+ C
Sbjct: 497 NGRPYVC 503
Score = 37.5 bits (83), Expect = 0.002
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 626 PESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFC 742
PE++ +Y C NGC K ++++ H TH +++P+ C
Sbjct: 437 PEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRC 475
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 299 STNKLQCSLCNKQFKYESERKRHEQSHS--LHFQCQICSKKFNFLSALRRHEKQHSRKGS 472
S +C LC F + KRH + H + C+ C K+FN L AL RH++++ G
Sbjct: 469 SDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQRNICVGG 527
Query: 473 V 475
V
Sbjct: 528 V 528
Score = 29.9 bits (64), Expect = 0.40
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 326 CNKQFKYESERKRHEQSH--SLHFQCQICSKKFNFLSALRRHEKQHSRKGSVQCNKCGGK 499
CNK+ + + H Q+H ++C +C F L+RH + H C +C +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 500 FRDEVLLKRH 529
F L RH
Sbjct: 509 FNRLDALNRH 518
Score = 29.1 bits (62), Expect = 0.70
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +2
Query: 404 CSKKFNFLSALRRHEKQHSRKGSVQCNKCGGKFRDEVLLKRHFNYAHKG-TFICEECGAS 580
C+K+ + H + H +C+ C F LKRH G ++C EC
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 581 FSSKPALRTH 610
F+ AL H
Sbjct: 509 FNRLDALNRH 518
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 560 CEECGASFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTH 718
C EC FS +L+ H H ER + C GC K FN +++ H+ H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHT--GERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 35.5 bits (78), Expect = 0.008
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 272 TTLAMTAEDSTNKLQCSLCNKQFKYESERKRHEQSHSLH--FQCQI--CSKKFNFLSALR 439
T + T+ + + +C+ C + F S K H SH+ F C C K FN S +R
Sbjct: 455 TGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMR 514
Query: 440 RHEKQH 457
RH++ H
Sbjct: 515 RHQRIH 520
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 551 TFICEECGASFSSKPALRTHLK-IHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKNE 727
+F+C EC F LR H++ +H SE+ + C C K F+ +L+ HE H N
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLH--TSEKPFVCI---CGKRFSRRDNLRQHERLHVNA 476
Query: 728 KP 733
P
Sbjct: 477 SP 478
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 470 SVQCNKCGGKFRDEVLLKRHFNYAHKGT--FICEECGASFSSKPALRTHLKIHRPESER 640
S C +C KF+ L+RH H F+C CG FS + LR H ++H S R
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASPR 479
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 317 CSLCNKQFKYESERKRHEQS-HSLH--FQCQICSKKFNFLSALRRHEKQH 457
C C+K+FK +RH +S H+ F C IC K+F+ LR+HE+ H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 30.7 bits (66), Expect = 0.23
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 389 FQCQICSKKFNFLSALRRHEKQ-HSRKGSVQCNKCGGKFRDEVLLKRH 529
F C CSKKF LRRH + H+ + C CG +F L++H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 39.1 bits (87), Expect = 7e-04
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 563 EECGASFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFC 742
E A+ + KP+ T P++ R YKC + C K F H H TH EKPH C
Sbjct: 3 EATTATTTGKPSRSTK----NPDAPRPYKCPL--CTKAFYRLEHQTRHIRTHTGEKPHVC 56
Query: 743 S 745
+
Sbjct: 57 T 57
Score = 31.9 bits (69), Expect = 0.100
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 296 DSTNKLQCSLCNKQFKYESERKRHEQSHS--LHFQCQI--CSKKFNFLSALRRHEKQHSR 463
D+ +C LC K F + RH ++H+ C C+K+F+ L RH + H+
Sbjct: 21 DAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Query: 464 KGS 472
S
Sbjct: 81 ANS 83
Score = 29.5 bits (63), Expect = 0.53
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 560 CEECGASFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTHKN 724
C C +F H++ H E+ + C+ GC K F+ L H H N
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHT--GEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 626 PESERRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFCS 745
P+ ++Y C C + F HLK H +H NEKP CS
Sbjct: 64 PQKVKQYVCET--CTRAFARLEHLKRHIRSHTNEKPFTCS 101
Score = 33.5 bits (73), Expect = 0.033
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +2
Query: 554 FICEECGASFSSKPALRTHLKIHRPESERRYKCS-----VNGCRKTFNFPH-HLKHHELT 715
++CE C +F+ L+ H++ H +E+ + CS GC + F+ L+H +
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSH--TNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 716 HKNEKP 733
H+N +P
Sbjct: 128 HRNPQP 133
Score = 33.5 bits (73), Expect = 0.033
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 389 FQCQICSKKFNFLSALRRHEKQHSRKGSVQCNK-------CGGKFRDEVLLKRHFNYAHK 547
+ C+ C++ F L L+RH + H+ + C++ CG +F LL RH H+
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHR 129
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 0.30
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 299 STNKLQCSLCNKQFKYESERKRHEQS 376
++N + C +CNK F+ +++ + HE S
Sbjct: 266 NSNPIMCMVCNKNFRSQNQLENHENS 291
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +2
Query: 347 ESERKRHEQSHSLHFQCQICSKKFNFLSALRRHEKQHSRKGSVQ 478
+ E E +S C +C+K F + L HE K +++
Sbjct: 256 DDESLSKEIVNSNPIMCMVCNKNFRSQNQLENHENSKKHKKNLR 299
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 30.3 bits (65), Expect = 0.30
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +2
Query: 449 KQHSRKGSVQCNKCGGKF-RDEVLLKRHFNYAHKGTFICEECGASFSSKPALRTHLKIHR 625
K S KGS C +CG F R E + + HK F C +C + R
Sbjct: 9 KSPSSKGSTVCFRCGQAFQRRETPISFGGHMWHKDCFCCTKCDKGLEHSDQMLVQTSDGR 68
Query: 626 P 628
P
Sbjct: 69 P 69
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 30.3 bits (65), Expect = 0.30
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 353 ERKRHEQSHSLHFQCQICSKKFNFLSALRRHEKQHSRKGSVQCNKCGGKFRDE 511
E + S + C C+KKF+ L L + +G+ CN CG + +D+
Sbjct: 124 EDRMRNDFDSKGYVCPFCNKKFSSLDVL----SLVTNEGTFACNVCGTELKDD 172
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 470 SVQCNKCGGKFRDEVLLKRHFNYAHKGTFICEECGASFSSKP 595
S QCN CGG F +R + G C C SF+ P
Sbjct: 30 SAQCNNCGGPF---TWFRRRHHCRWCGKLFCYNCCNSFAKLP 68
>SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 609
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 629 ESERRYKCSVNGCRKTFNFPHHL-KHHELTHKNEKPH 736
E E++Y+C V C K F P + KH HK+ H
Sbjct: 469 EDEQKYRCHVGTCAKLFLGPEFVRKHINKKHKDWLDH 505
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 29.1 bits (62), Expect = 0.70
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 551 TFICEECGASFSSKPALRTHLKIHRPESERRYKCSVNGCRKTFNFPHHLKHHELTH 718
++ C C F + H++ H E+ ++CS C+K F L H TH
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHT--GEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 638 RRYKCSVNGCRKTFNFPHHLKHHELTHKNEKPHFCS 745
+ Y+C C++ F+ H H +H EKP CS
Sbjct: 2 KSYECPF--CKRVFHRQEHQVRHIRSHTGEKPFECS 35
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/47 (19%), Positives = 24/47 (51%)
Frame = +2
Query: 338 FKYESERKRHEQSHSLHFQCQICSKKFNFLSALRRHEKQHSRKGSVQ 478
+ + +E ++ + + F C++C K F ++ H+K + +V+
Sbjct: 226 YSHNAEAEKDGKDSTEAFYCEVCQKFFGKITVFEAHKKSKAHNKAVK 272
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 635 ERRYKCSVNGCRKTFNFPHHLKHHEL 712
++ YKC V C K + + LK+H+L
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKL 372
Score = 27.1 bits (57), Expect = 2.8
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 389 FQCQICSKKFNFLSALRRHEKQHS 460
++C++CSK++ L+ L+ H + HS
Sbjct: 399 YRCEVCSKRYKNLNGLKYH-RTHS 421
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 404 CSKKFNFLSALRRHEKQHSRKGSVQCNKCGGKFRDEVLLKRHFNYAHKGTFICEECG-AS 580
C + F+ H ++ + C C K DE+++ ++Y HK C G +
Sbjct: 1309 CGEYFSSFLNSSGHGIVYNPEAYSSCQYCPYKNADELMVGFGYHYNHKWRNFCIMIGYTA 1368
Query: 581 FSSKPALRTHLKIHRPESER 640
F+ A+ + IH+ +R
Sbjct: 1369 FNLGAAIALYYIIHKTPWKR 1388
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 380 SLHFQCQICSKKFNFLSALRRHEKQ 454
S+ F C C+++F L A+R H +Q
Sbjct: 256 SIGFTCLTCNREFKSLEAVRAHMQQ 280
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 311 LQCSLCNKQFKYESERKRHEQSHSL-HFQCQICSKK 415
+ C++C ++F Y+ +E + S+ F C IC ++
Sbjct: 1368 IDCTICERRFHYDCVGLNNEIADSVSKFTCPICMEQ 1403
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,771,754
Number of Sequences: 5004
Number of extensions: 53977
Number of successful extensions: 226
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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