Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30n15
(566 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 76 4e-15
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 66 4e-12
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 61 1e-10
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 54 1e-08
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 54 1e-08
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 50 2e-07
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 46 5e-06
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 43 3e-05
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 8e-05
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 41 1e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 1e-04
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 38 0.001
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 37 0.002
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 29 0.36
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 3.4
SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|c... 26 3.4
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 26 4.4
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 26 4.4
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 75.8 bits (178), Expect = 4e-15
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Frame = +3
Query: 105 GKSNAADAVVKEIKDKGGVAVADYNSVVEGEK-LIKT---AIDNFG-RIDILINNAGI-L 266
G++ A E++DK GV Y+ +E +I+T A++ G R+D++I NAGI +
Sbjct: 41 GRNKKALEYAAELRDKHGVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAI 100
Query: 267 RDKSFXXMTEQDWDLXQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQ-- 440
S E W ++L GA+ T AA F+KQ G ++ T+S +G N+ Q
Sbjct: 101 PHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQW 160
Query: 441 ANYSAAKLXLVGLANTLAIEGAKYNIKVNTIVP 539
A+Y A K + LA LA+E A + +VN++ P
Sbjct: 161 ASYHATKAAVKHLARALAVEWAPF-ARVNSVSP 192
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 65.7 bits (153), Expect = 4e-12
Identities = 39/134 (29%), Positives = 59/134 (44%)
Frame = +3
Query: 138 EIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFXXMTEQDWDLXQ 317
+++D AD + + E I+ I G ID+LINNAG+ D F ++ + WD
Sbjct: 42 KVQDAALALQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDV 101
Query: 318 AVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLXLVGLANTLAI 497
++ L+G + T KQ G ++ + G YSAAK L L LA+
Sbjct: 102 SLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPAYSAAKAGLENLTKALAV 161
Query: 498 EGAKYNIKVNTIVP 539
I+VN P
Sbjct: 162 RYGPLGIRVNVCAP 175
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 61.3 bits (142), Expect = 1e-10
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = +3
Query: 225 FGRIDILINNAGILRDKSFXXMTEQDWDLXQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 404
F IDI++ N GI KS MT +++ V+L G F H A F+KQ +G +V T
Sbjct: 96 FDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVAT 155
Query: 405 SSNAGLFGNFGQAN--YSAAKLXLVGLANTLAIEGAKYNIKVNTIVP 539
+S +G+ N Q Y+ +K ++ L +LA+E K+ +VN + P
Sbjct: 156 ASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRKF-ARVNCVSP 201
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 54.4 bits (125), Expect = 1e-08
Identities = 38/127 (29%), Positives = 54/127 (42%)
Frame = +3
Query: 159 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFXXMTEQDWDLXQAVHLKGA 338
V D N+ +K ++ AI +FGRID+L+NNAG TE+ ++ GA
Sbjct: 18 VTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGA 77
Query: 339 FKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLXLVGLANTLAIEGAKYNI 518
+ A FR Q G I+ SS G Y K + G++ L E +
Sbjct: 78 LEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGV 137
Query: 519 KVNTIVP 539
KV I P
Sbjct: 138 KVKIIEP 144
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 54.4 bits (125), Expect = 1e-08
Identities = 38/127 (29%), Positives = 54/127 (42%)
Frame = +3
Query: 159 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFXXMTEQDWDLXQAVHLKGA 338
V D N+ +K ++ AI +FGRID+L+NNAG TE+ ++ GA
Sbjct: 18 VTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGA 77
Query: 339 FKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLXLVGLANTLAIEGAKYNI 518
+ A FR Q G I+ SS G Y K + G++ L E +
Sbjct: 78 LEVIKAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGV 137
Query: 519 KVNTIVP 539
KV I P
Sbjct: 138 KVKIIEP 144
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 50.4 bits (115), Expect = 2e-07
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 171 DYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFXXMTEQDWDLXQAVHLKGAFKTT 350
D V E K A FG +DI+INNAG F ++ V+ G T
Sbjct: 55 DVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYIT 114
Query: 351 HAAWETFRKQ-KYGRIVMTSSNAGLFGNFGQANYSAAKLXLVGLANTLAIE-GAKYNIKV 524
A R+ K GRI+ SS AG + + + Y+A+K + GL+ T+ E +NI +
Sbjct: 115 KEALNLMRESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRELDPNWNIAI 174
Query: 525 NTIVP 539
+ P
Sbjct: 175 TIVQP 179
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 45.6 bits (103), Expect = 5e-06
Identities = 29/141 (20%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Frame = +3
Query: 135 KEIKDKGGVAVADYNSVVEGEKLIKTAIDN----FGRIDILINNAGILRDKSFXXMTEQD 302
K++ ++ GV V + ++ ++ F I +++ NAG+ +S +
Sbjct: 62 KKLAEETGVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHE 121
Query: 303 WDLXQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQ--ANYSAAKLXLVG 476
++ ++ ++ + + F+KQ +G ++ T+S + N Q A Y A+K +
Sbjct: 122 FEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQ 181
Query: 477 LANTLAIEGAKYNIKVNTIVP 539
L LA+E A++ ++N++ P
Sbjct: 182 LCKALAVEWAEF-ARINSVSP 201
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 43.2 bits (97), Expect = 3e-05
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +3
Query: 159 VAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFXXMTEQDWDLXQAVHLKGA 338
+ +AD S ++ K I +++ ID +++ AG+L+ +E++ D +L A
Sbjct: 55 LTIADVQSDMKNLKSIFESVE----IDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSA 110
Query: 339 FKTTHAA---WETFRKQKYGRIVMT-SSNAGLFGNFGQANYSAAKLXLVGLANTLAIEGA 506
K + A W + + R+++ SS + G + Y+A+K L LA E A
Sbjct: 111 IKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVA 170
Query: 507 KYNIKVNTIVP 539
I+VN I P
Sbjct: 171 SKGIRVNAISP 181
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 41.5 bits (93), Expect = 8e-05
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +3
Query: 201 LIKTAIDNFGRIDILINNAGILR-DKSFXXMTEQDWDLXQAVHLKGAFKTTHAAWETFRK 377
L+ A+ G ID+L+NN + +S + ++ WDL ++ F T AA +
Sbjct: 111 LVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKS 170
Query: 378 QKYGRIVMTSSNAGLFGNFGQANYSAAKLXLVGLANTLAIEGAKYNIKVNTIVP 539
IV SS G +Y++ K + L+ + A++ I+VN + P
Sbjct: 171 G--SSIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAP 222
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 41.1 bits (92), Expect = 1e-04
Identities = 41/152 (26%), Positives = 67/152 (44%)
Frame = +3
Query: 81 LXSARDGAGKSNAADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDILINNAG 260
L +AR N A ++ +K + V D +SV E E+ ++ + G + LINNAG
Sbjct: 33 LATARQVERMDNLTKAGLQTLK----LDVTDEDSVREVEQEVRKFTN--GSLHYLINNAG 86
Query: 261 ILRDKSFXXMTEQDWDLXQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQ 440
+ +D V+ G + A + K G IV +S
Sbjct: 87 APCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK-GTIVNVNSLVSYVPFAFN 145
Query: 441 ANYSAAKLXLVGLANTLAIEGAKYNIKVNTIV 536
A Y+A+K L+ +NTL IE A + ++V +I+
Sbjct: 146 AAYNASKAALLAYSNTLRIELAPFGVQVTSIM 177
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 40.7 bits (91), Expect = 1e-04
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Frame = +3
Query: 102 AGKSNAADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDN----FGRIDILINNAGI-L 266
A + + + + KE++ K V+V V K I I++ F ID+LINNAG+ L
Sbjct: 38 ARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLAL 97
Query: 267 RDKSFXXMTEQDWDLXQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQAN 446
+ D ++ G T A F + G I+ S AG G +
Sbjct: 98 GTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSV 157
Query: 447 YSAAKLXLVGLANTLAIEGAKYNIKVNTIVP 539
Y + K L + L E I++ + P
Sbjct: 158 YCSTKSALAQFTSALRKETIDTRIRIMEVDP 188
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 37.5 bits (83), Expect = 0.001
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 165 VADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDK-SFXXMTEQDWDLXQAVHLKGAF 341
V S E + + A+D ID+L N+GI + + E+ W+ ++ G
Sbjct: 63 VTSQQSANEAAQSVAKAVDG---IDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPI 119
Query: 342 KTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSA 455
A + K+K +++ TSS G G+F +SA
Sbjct: 120 HVFKAFYPLLTKKKTRQVIFTSSECGSMGDFRATGFSA 157
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 37.1 bits (82), Expect = 0.002
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +3
Query: 192 GEKLIKTAIDNFGRIDILINNAGILRD-KSFXXMTEQDWDLXQAVHLKGAFKTTHAAWET 368
G+ I+TAI FG++D +I NAG+L +W ++ +T A
Sbjct: 65 GKASIETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYAIPH 124
Query: 369 FRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLXLVGLANTLAIE 500
RK K G IV+ SS A + A Y +K + L L E
Sbjct: 125 LRKTK-GTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSE 167
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 29.5 bits (63), Expect = 0.36
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 234 IDILINNAGILRDKSFXXM---TEQDWDLXQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 404
ID+L N+GI KSF + +++ W ++ G A + ++ K IV T
Sbjct: 84 IDVLWVNSGI--SKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFT 141
Query: 405 SSNAGLFGNFGQANYSA 455
SS A G YSA
Sbjct: 142 SSMAACMGGVRPNTYSA 158
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -2
Query: 238 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAA 116
S+LP S++ S ++T SA++T PLS ++ TTA++A
Sbjct: 413 SVLPTSSVSSTPLSSANSTTATSASST-PLSSVNSTTATSA 452
Score = 25.4 bits (53), Expect = 5.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 238 SILPKLSIAVFISFSPSTTEL*SATATPPLSLISLTTASAA 116
S+LP S++ S ++T SA++TP S+ S T SA+
Sbjct: 527 SVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSAS 567
>SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 396 VMTSSNAGLFGNFGQANYSAAKLX-LVGLANTLAIEGAKYNI 518
V +N L+ F + A + L+G+ TLAI G Y++
Sbjct: 93 VANDANVALYSTFAGLGFFAGSICNLIGVKLTLAIGGTGYSV 134
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2
Query: 346 VLKAPFKWTAW 314
VLKAPF W+AW
Sbjct: 200 VLKAPFFWSAW 210
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 360 WETFRKQKYGRIVMTSSNAGLFGNFGQAN 446
W FR + IV T + G F N G N
Sbjct: 80 WRPFRGEVVDAIVTTVNKMGFFANIGPLN 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,101,387
Number of Sequences: 5004
Number of extensions: 39204
Number of successful extensions: 124
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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