Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30n05
         (746 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    28   6.9  
03_06_0598 + 34977063-34977220,34977957-34978101,34978362-349784...    28   9.1  

>11_01_0110 +
           850780-850805,851465-851537,851558-851720,851947-852260,
           852330-852409,852506-852848,853068-853166,853240-853360,
           853567-853723,853976-854099,855275-855368,855866-857259,
           857882-857924,858240-858458,859379-859605,859701-859948,
           860246-860552,860725-861153
          Length = 1486

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 720 SXIHKIQLLVLLTSHLTNDCNACPLCK 640
           S I  +  +++ TSH  ND   CP+CK
Sbjct: 854 SFIENLPSVIISTSHQINDDVICPVCK 880


>03_06_0598 +
           34977063-34977220,34977957-34978101,34978362-34978481,
           34978640-34978774,34979138-34979213,34979398-34979450,
           34979594-34979695,34979848-34979964,34980170-34980228,
           34980810-34980984,34981628-34981762,34981855-34981953,
           34982143-34982251,34982981-34983093,34983206-34983265,
           34983821-34983835
          Length = 556

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 382 GETAEIKRASPLSNPTESMCSGRKGKMQPTPERKQKRTHFKV 257
           G T+E +   P  N   S C G   +M+P   R+   T +KV
Sbjct: 492 GTTSEPREELPSINEIRSRCMGYLDRMRPDHMRRLNPTPYKV 533


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,556,133
Number of Sequences: 37544
Number of extensions: 349997
Number of successful extensions: 804
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)