Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30m22
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001691-1|AAN71446.1|  279|Drosophila melanogaster RE58929p pro...    65   9e-11
AE013599-3997|AAF47303.1|  279|Drosophila melanogaster CG2765-PA...    65   9e-11

>BT001691-1|AAN71446.1|  279|Drosophila melanogaster RE58929p
           protein.
          Length = 279

 Score = 64.9 bits (151), Expect = 9e-11
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +1

Query: 346 NTLRKIARNDGAEFSKQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGD 498
           N LR+IAR+D  +FSK SI+N MEKFVK VN MD+T+LVP RLM+  Q GD
Sbjct: 15  NCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDTILVPCRLMD-RQIGD 64



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 508 FSMFSMLNDLKTELLWSGGDSQEQVERGRR 597
           F++++MLN LK +LLW+     +  +   +
Sbjct: 109 FNLYNMLNSLKKDLLWTANQEDDDQQHSEQ 138


>AE013599-3997|AAF47303.1|  279|Drosophila melanogaster CG2765-PA
           protein.
          Length = 279

 Score = 64.9 bits (151), Expect = 9e-11
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +1

Query: 346 NTLRKIARNDGAEFSKQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGD 498
           N LR+IAR+D  +FSK SI+N MEKFVK VN MD+T+LVP RLM+  Q GD
Sbjct: 15  NCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDTILVPCRLMD-RQIGD 64



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 508 FSMFSMLNDLKTELLWSGGDSQEQVERGRR 597
           F++++MLN LK +LLW+     +  +   +
Sbjct: 109 FNLYNMLNSLKKDLLWTANQEDDDQQHSEQ 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,617,520
Number of Sequences: 53049
Number of extensions: 522483
Number of successful extensions: 973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)