Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30m13
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 166 1e-41
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 134 6e-32
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 94 8e-20
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 46 3e-05
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 46 3e-05
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 34 0.12
Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 29 4.4
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 26 5.6
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 166 bits (404), Expect = 1e-41
Identities = 72/149 (48%), Positives = 105/149 (70%)
Frame = +3
Query: 249 KSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHVGHCHPHV 428
K E ++ R+ +G+ CQ+F+ P + R Q++YDE ++LDCI+NV HVGHCHP V
Sbjct: 27 KEEILKRRKDTIGSKCQIFYSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHVGHCHPKV 86
Query: 429 VEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIH 608
VEA Q++ + N R++ +L A+++++TLP L F NSGSEANDLALR+AR +
Sbjct: 87 VEAISKQLATSTCNVRFVSTQLTDCAEQILSTLP-GLDTVLFCNSGSEANDLALRLARDY 145
Query: 609 TKKKDVITLDHAYHGHLTTMIDISPYKFN 695
TK KD I ++HAYHGH+TT +++SPYKF+
Sbjct: 146 TKHKDAIVIEHAYHGHVTTTMELSPYKFD 174
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 134 bits (324), Expect = 6e-32
Identities = 60/134 (44%), Positives = 88/134 (65%)
Frame = +3
Query: 249 KSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHVGHCHPHV 428
K E ++ R+ +G+ CQ+F+ P + R Q++YDE ++LDCI+NV HVGHCHP V
Sbjct: 27 KEEILKRRKDTIGSKCQIFYSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHVGHCHPKV 86
Query: 429 VEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIH 608
VEA Q++ + N R++ +L A+++++TLP L F NSGSEANDLALR+AR +
Sbjct: 87 VEAISKQLATSTCNVRFVSTQLTDCAEQILSTLP-GLDTVLFCNSGSEANDLALRLARDY 145
Query: 609 TKKKDVITLDHAYH 650
TK KD I ++ H
Sbjct: 146 TKHKDAIVIEQLVH 159
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 94.3 bits (224), Expect = 8e-20
Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = +3
Query: 321 LKIVRGIAQFMYDETGERYLDCINNVA--HVGHCHPHVVEAGRNQ-MSLISTNNRYLHDE 491
L I +G QF++D G++YLD + VGHCHP + A Q L T + Y +
Sbjct: 23 LLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKINAALTEQAQKLWHTTSIYHTEP 82
Query: 492 LVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIHTKKKDVITLDHAYHGHLTTMI 671
+ A++L++ P L+ FFVNSGSEANDLAL +AR +T + DVI++ + YHG T++
Sbjct: 83 IYEYAEKLLSKFPSKLNSVFFVNSGSEANDLALALARNYTGRFDVISMRNGYHGMTQTVL 142
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +3
Query: 252 SETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPH 425
S+ I REK G C + + P+ + +G F++D G++Y D + + V GHCHP
Sbjct: 21 SQQIFDREKKFG--CHNY-KPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPK 77
Query: 426 VVEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMAR 602
+++ + Q S ++ +R ++ ++ + V L + V +N+G EA + A+++AR
Sbjct: 78 LLKVVQEQASTLTLTSRAFYNNVLGEYEEYVTKLFKYDKV-LPMNTGVEACESAVKLAR 135
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +3
Query: 252 SETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPH 425
S+ I REK G C + + P+ + +G F++D G++Y D + + V GHCHP
Sbjct: 21 SQQIFDREKKFG--CHNY-KPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPK 77
Query: 426 VVEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMAR 602
+++ + Q S ++ +R ++ ++ + V L + V +N+G EA + A+++AR
Sbjct: 78 LLKVVQEQASTLTLTSRAFYNNVLGEYEEYVTKLFKYDKV-LPMNTGVEACESAVKLAR 135
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 252 SETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCI--NNVAHVGHCHPH 425
S+ I REK G C + + P+ + +G F++D G++Y D + + + GHCHP
Sbjct: 21 SQQIFDREKKFG--CHNY-KPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPK 77
Query: 426 VVEAGRNQMSLISTNNRY 479
+++ N+ ++ N +
Sbjct: 78 LLK--DNEAVVVFAENNF 93
>Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical
protein H25K10.5 protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 260 HSTSRETCWSGVPTVFPFF 316
++T+ +TCW G P VF FF
Sbjct: 171 NNTALDTCWLGKPEVFTFF 189
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 64 TRTPSIRPMTTRQLIK 17
+RTP+IRPMTTR L K
Sbjct: 322 SRTPNIRPMTTRTLSK 337
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 62 RLRRRTEIYKTVLCQIF 112
RLRRR +KT LC+ F
Sbjct: 61 RLRRRENAFKTALCKTF 77
Score = 21.0 bits (42), Expect(2) = 5.6
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 86 YKTVLCQIFCST 121
YKTVLC F +T
Sbjct: 112 YKTVLCDNFSTT 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,567,718
Number of Sequences: 27780
Number of extensions: 339655
Number of successful extensions: 904
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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