Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30m09
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 36 0.028
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 34 0.11
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 34 0.11
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 34 0.11
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 34 0.11
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 34 0.11
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 33 0.15
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.26
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 33 0.26
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.34
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.4
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.4
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.4
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.2
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.2
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 5.5
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 28 5.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 5.5
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 5.5
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 5.5
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 5.5
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 5.5
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 27 9.7
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.028
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 581
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 582 AAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP 689
+ K AP + ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 33.9 bits (74), Expect = 0.11
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 438 AEAKSADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMV 605
A A+SA VEE AA E ++ V+ AT A S E+P A +A+S P
Sbjct: 610 APAESAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEE 668
Query: 606 KKIDLAPT-VES--DAAAIPEIKTPEAADAP 689
K + +PT +ES D + + E+A AP
Sbjct: 669 HKDEASPTALESVEDVIEAVHVASTESAPAP 699
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 594 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKL 695
P + D +S DA+A + PEA +AP++
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEI 146
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 489 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 668
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 669 PEAADAP 689
PE D P
Sbjct: 79 PEVQDVP 85
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 594 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKL 695
P + D +S DA+A + PEA +AP++
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEI 183
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 489 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 668
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 669 PEAADAP 689
PE D P
Sbjct: 116 PEVQDVP 122
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 594 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKL 695
P + D +S DA+A + PEA +AP++
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEI 183
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 489 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 668
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 669 PEAADAP 689
PE D P
Sbjct: 116 PEVQDVP 122
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 594 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKL 695
P + D +S DA+A + PEA +AP++
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEI 183
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 489 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 668
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 669 PEAADAP 689
PE D P
Sbjct: 116 PEVQDVP 122
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 438 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 617
AE K D K E P +P+ + E + +KP +T + + +AA K+
Sbjct: 341 AEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAA----STKR-- 394
Query: 618 LAPTVESDAAAIPEIKTPEAADAP 689
PT E A E+K+ AA P
Sbjct: 395 -PPTTEKPTATTEEVKSTTAAAKP 417
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 447 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 623
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 624 PTVESDAAAIPEIKTPEAADAP 689
P AA + + +A+ AP
Sbjct: 125 P-----AAPVAPPQLTQASPAP 141
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 32.7 bits (71), Expect = 0.26
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Frame = +3
Query: 294 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 473
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 474 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID----LAPTVESD 641
PA P +T A AE + P+A + +A +A P D AP E
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETPAPAPAAEET 622
Query: 642 AAAIPEI-KTPEAADA 686
A P + +TP A A
Sbjct: 623 PAPAPAVEETPAPAPA 638
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 587
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 588 IIPNMVKKIDLAPTVESDAAAIPEIKTPEAADA 686
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/86 (25%), Positives = 30/86 (34%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 611
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 612 IDLAPTVESDAAAIPEIKTPEAADAP 689
+ P + AA P A +AP
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP 721
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = +3
Query: 432 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 599
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEAADAP 689
A + E+ A I +T A P
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVP 378
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 462 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 638
K+EE A + E+ K ++Q+ A D S D +IP VK I PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPL 494
Query: 639 DAAAIPEIKTPEA 677
+ + +++ P A
Sbjct: 495 ETQDV-DMREPSA 506
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 599
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 692
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 593
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 594 -PNMVKKIDLAPTVESDAAAIPEIKT 668
P +K +PT + + + P KT
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKT 1454
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 599
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 692
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 593
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 594 -PNMVKKIDLAPTVESDAAAIPEIKT 668
P +K +PT + + + P KT
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKT 1454
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 599
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 692
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 593
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 594 -PNMVKKIDLAPTVESDAAAIPEIKT 668
P +K +PT + + + P KT
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKT 1454
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 599
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 600 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 692
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 593
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 594 -PNMVKKIDLAPTVESDAAAIPEIKT 668
P +K +PT + + + P KT
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKT 1454
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 465 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 611
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 540 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPK 692
EKP++ +AE D + K ++L V A PE PEA+ K
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYK 330
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 575
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 483 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 483 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 621 APTVESDAAAIPEIKTP 671
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 621 APTVESDAAAIPEIKTP 671
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 621 APTVESDAAAIPEIKTP 671
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 621 APTVESDAAAIPEIKTP 671
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 572
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 573 ADSAAIIPNMVKK 611
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 28.3 bits (60), Expect = 5.5
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 426 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 605
E P A+ + +K+ + P+ KT VA+ KE+KP + +A A I +V
Sbjct: 314 EKPTAKTAAPPVKLLTSSPPPKIPKT-----VAQPPKEKKPVMESVKTAAPPAKEIKPIV 368
Query: 606 KKIDLAPTVESDAAAIP-EIKTPEAADA 686
KI T ++ A+P E+K +AA A
Sbjct: 369 AKI----TEKAAEPAVPKEVKPAKAATA 392
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/89 (25%), Positives = 33/89 (37%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 594 PNMVKKIDLAPTVESDAAAIPEIKTPEAA 680
P K D +P A +P+ + AA
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAA 636
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 426 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 433 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 534
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 444 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 621 APTVESDAAAIPEIKTPEAA 680
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 429 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVA-EISKEEKPSATDAEGSADSAAIIPNMV 605
+PD E D +VEEP A+ K V A A E + E +A+ S++ + P+
Sbjct: 1 MPDPEDPGRDEEVEEPLAK----KIRVVAQEAGEDEESEMEKEPNADLSSEEELVAPDAE 56
Query: 606 KKIDLAPTVESDAAA 650
D P ++++A A
Sbjct: 57 ---DFVPEIDNEATA 68
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +3
Query: 456 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVE 635
DIK + A + ++ +T+ + + +E K + D+ P K ++
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 636 SDAAAIPEIKTPEAADAPKL 695
+ IPE +TPEA P +
Sbjct: 294 PELDEIPEARTPEAEGPPMM 313
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 444 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 621 APTVESDAAAIPEIKTPEAA 680
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,940,252
Number of Sequences: 27780
Number of extensions: 195848
Number of successful extensions: 842
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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