Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30m05
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 50 2e-06
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 47 2e-05
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 42 3e-04
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 42 6e-04
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 41 0.001
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 37 0.017
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 35 0.051
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 33 0.16
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 33 0.21
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 33 0.21
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 33 0.21
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 33 0.21
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 33 0.21
Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.36
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 31 0.63
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 31 0.83
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 29 2.5
U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 29 4.4
U09277-1|AAC13764.1| 532|Caenorhabditis elegans UNC-17 protein. 29 4.4
L19621-1|AAC14456.1| 532|Caenorhabditis elegans acetylcholine t... 29 4.4
AF036701-4|AAB88371.1| 532|Caenorhabditis elegans Uncoordinated... 29 4.4
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical pr... 28 5.9
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 28 5.9
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 28 5.9
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical ... 28 5.9
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 28 5.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 7.8
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 7.8
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/121 (26%), Positives = 48/121 (39%)
Frame = +3
Query: 333 AAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGIT 512
AA Y+ + LGDR+GRK + + C L + W LARA G +
Sbjct: 138 AAYYVGQMAGSTTFGMLGDRIGRKKVFFLAIVIQITCAYLIAIAPYWWLYALARAGTGFS 197
Query: 513 MAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLPYRAVLWLCLALPT 692
G +V + E+ R L + LF G +FL + +L + +A P
Sbjct: 198 HPGIFVIAVVIGMELVGPKYRKLASVITGLFFALGQIFLGIEAIYFTNYQILHVVIASPA 257
Query: 693 L 695
L
Sbjct: 258 L 258
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 354 VPADYFMAFLGDRVGRKPAL---LFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGS 524
+PA + + L DR+GR+ L LF++ +L L +++ W + A ++ G
Sbjct: 408 IPALFIVYLLIDRIGRRLILAGGLFIAGACLLVNWLMGDNVQLWMAITQMAFTKGSITGV 467
Query: 525 YVTCPLYTKEISEDSVR 575
Y Y+ E+ +R
Sbjct: 468 YAAIYTYSPELFPTVIR 484
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = +3
Query: 309 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 476
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 139 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 198
Query: 477 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLPY 656
+ +A G T G Y + E+ R + + +F G + L V+ +
Sbjct: 199 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVD 258
Query: 657 RAVLWLCLALPTLHLVLFMAM 719
+L +A+P+L + + M
Sbjct: 259 YRLLHASIAIPSLIFITYYWM 279
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = +3
Query: 309 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 476
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 105 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 164
Query: 477 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLPY 656
+ +A G T G Y + E+ R + + +F G + L V+ +
Sbjct: 165 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVD 224
Query: 657 RAVLWLCLALPTLHLVLFMAM 719
+L +A+P+L + + M
Sbjct: 225 YRLLHASIAIPSLIFITYYWM 245
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = +3
Query: 309 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 476
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 139 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 198
Query: 477 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLPY 656
+ +A G T G Y + E+ R + + +F G + L V+ +
Sbjct: 199 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVD 258
Query: 657 RAVLWLCLALPTLHLVLFMAM 719
+L +A+P+L + + M
Sbjct: 259 YRLLHASIAIPSLIFITYYWM 279
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = +3
Query: 309 DGEVSWMGAAA----YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW 476
DG+ W+ A ++ + + + D++GRK L + + V+C +L + + W
Sbjct: 105 DGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWW 164
Query: 477 ALVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLPY 656
+ +A G T G Y + E+ R + + +F G + L V+ +
Sbjct: 165 IYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVD 224
Query: 657 RAVLWLCLALPTLHLVLFMAM 719
+L +A+P+L + + M
Sbjct: 225 YRLLHASIAIPSLIFITYYWM 245
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 378 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA---LVLARALVGITMAGSYVTCPLYT 548
+L D+VGR+ AL + + +A+ L + A ++L R ++G+ S P++
Sbjct: 119 WLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFL 178
Query: 549 KEISEDSVRGLLGSV 593
EIS +++RG+LGS+
Sbjct: 179 TEISPNNLRGMLGSL 193
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 378 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA---LVLARALVGITMAGSYVTCPLYT 548
+L D+VGR+ AL + + +A+ L + A ++L R ++G+ S P++
Sbjct: 101 WLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFL 160
Query: 549 KEISEDSVRGLLGSV 593
EIS +++RG+LGS+
Sbjct: 161 TEISPNNLRGMLGSL 175
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = +3
Query: 387 DRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEISED 566
D +GR+ +L S++ + ++ +S+ L++ R L+GI + + + P+Y E +
Sbjct: 90 DYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPT 149
Query: 567 SVRGLLGSVVTLFHCAGNLFLYVVGDVL----PYRA---VLWLCLALPT-LHLVLFMAMP 722
VRG+L + L G + + G PY +++ A+P+ + V FM +P
Sbjct: 150 HVRGMLVAAFALMISFGQVVANITGGAFSYIDPYNVGWRLMFAFAAVPSIIQFVCFMFLP 209
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = +3
Query: 366 YFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLY 545
+F DR GRKP ++ + + V V+ + +++ R +G+ + + + P+Y
Sbjct: 84 WFSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVY 143
Query: 546 TKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLPY 656
E S VRG L S + G + ++G V Y
Sbjct: 144 LGEASPTHVRGTLVSAFAMMISFGQVVANIMGGVFSY 180
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 378 FLGDRVGRKPALLFVSSVAVLCWV-LKLSSMETW--ALVLARALVGITMAGSYVTCPLYT 548
FL D+ GRK LL+ + +A+L V L S + + +V R LVG+ + P++
Sbjct: 120 FLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFLVGLNCGITSGLVPMFL 179
Query: 549 KEISEDSVRGLLGS 590
E++ ++RG GS
Sbjct: 180 TELAPANLRGKCGS 193
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/90 (22%), Positives = 41/90 (45%)
Frame = +3
Query: 387 DRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEISED 566
D +GRK ++ S + ++ ++ L++ R L+G+ + + + P+Y E S
Sbjct: 93 DFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPS 152
Query: 567 SVRGLLGSVVTLFHCAGNLFLYVVGDVLPY 656
+RG L + L G + ++G Y
Sbjct: 153 HIRGKLVTGFQLMITVGLVIANIIGGAFSY 182
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +3
Query: 336 AAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITM 515
+ +L + + + +L D +GR+P +F + V +L + + + + R LVG +
Sbjct: 112 STFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGFAI 171
Query: 516 AGSYVTCPLYTKEI 557
AG+ Y E+
Sbjct: 172 AGTLTVGWTYASEM 185
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 34.7 bits (76), Expect = 0.068
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 315 EVSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLA- 491
+ +W+ ++ + LGD GRKP F SV +L V +W + A
Sbjct: 95 DAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVAS-GFAPSWEVFAAF 153
Query: 492 RALVGITMAGSYVTCPLYTKEISEDSVRGLLGS 590
R +VG ++A + Y E E R L S
Sbjct: 154 RFIVGTSIASILIVFYAYILEFIEPEQRVFLRS 186
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +3
Query: 327 MGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVG 506
+ A ++ + + + FL D+ GR+ L + C VL + ++ + R L+G
Sbjct: 118 LSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIG 177
Query: 507 ITMAGSYVTCPLYTKEI 557
I+++G+ Y E+
Sbjct: 178 ISVSGTLTVGWTYATEM 194
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +1
Query: 619 TCSCTWWATCSRTAPCC-GC 675
TCSCT + CSR +PCC GC
Sbjct: 75 TCSCTSASRCSRCSPCCSGC 94
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 378 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEI 557
++ D+ GR+ + + +V ++C + + + ++ R G+ + + E
Sbjct: 174 YVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 233
Query: 558 SEDSVRGLLGSVVTLFHCAGNLFLYVVG-DVLPYRAVLWLCLALPTLHLVLFMAMP 722
+S R G + +LF A L VV + +R + + C A +++ + +P
Sbjct: 234 MGNSGRIFSGLMTSLFFGAAMALLGVVAMFIRRWRQLTFFCNAPFAFYIIYYFFLP 289
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 378 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEI 557
++ D+ GR+ + + +V ++C + + + ++ R G+ + + E
Sbjct: 157 YVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 216
Query: 558 SEDSVRGLLGSVVTLFHCAGNLFLYVVG-DVLPYRAVLWLCLALPTLHLVLFMAMP 722
+S R G + +LF A L VV + +R + + C A +++ + +P
Sbjct: 217 MGNSGRIFSGLMTSLFFGAAMALLGVVAMFIRRWRQLTFFCNAPFAFYIIYYFFLP 272
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 580 CSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
C C T TC CT TC R CCGC
Sbjct: 93 CCCCCRRCCTCCRTCCCTRCCTCCRPC-CCGC 123
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCC 669
CG C C R C+C C+R CC
Sbjct: 84 CGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 116
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Frame = +1
Query: 571 CGVCSAAW*HCSTA-RATCSCTWWATCSRTAPCCGC 675
CG C C R C C TC RT C C
Sbjct: 77 CGCCGCGCGCCCCRPRCCCCCRRCCTCCRTCCCTRC 112
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 580 CSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
C C T TC CT TC R CCGC
Sbjct: 91 CCCCCRRCCTCCRTCCCTRCCTCCRPC-CCGC 121
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCC 669
CG C C R C+C C+R CC
Sbjct: 82 CGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 114
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 580 CSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
C C T TC CT TC R CCGC
Sbjct: 92 CCCCCRRCCTCCRTCCCTRCCTCCRPC-CCGC 122
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCC 669
CG C C R C+C C+R CC
Sbjct: 83 CGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCC 115
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 580 CSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
C C T TC CT TC R CCGC
Sbjct: 92 CCCCCRRCCTCCRTCCCTRCCTCCRPC-CCGC 122
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCC 669
CG C C R C+C C+R CC
Sbjct: 83 CGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 115
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 580 CSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
C C T TC CT TC R CCGC
Sbjct: 93 CCCCCRRCCTCCRTCCCTRCCTCCRPC-CCGC 123
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCC 669
CG C C R C+C C+R CC
Sbjct: 84 CGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 116
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 378 FLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEI 557
++ D+ GR+ + + +V ++C + + + ++ R G+ + + E
Sbjct: 157 YVADKFGRRRSFFVILTVLIVCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEF 216
Query: 558 SEDSVRGLLGSVVTLFHCAGNLFLYVVG-DVLPYRAVLWLCLALPTLHLVLFMAMP 722
+S R G + +LF A L VV + +R + + C A +++ + +P
Sbjct: 217 MGNSGRIFSGLMTSLFFGAAMALLGVVAMFIRRWRQLTFFCNAPFAFYIIYYFFLP 272
>Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical
protein ZK829.9 protein.
Length = 492
Score = 32.7 bits (71), Expect = 0.27
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Frame = +3
Query: 270 LQSPNSPRDPPLTDGEVSWM----GAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAV 437
L + + R PL EVS + +A YL V FL D GRK A +
Sbjct: 48 LNNSFTERYRPLDHEEVSLLKSGINSAWYLFQVVGAMSSPFLCDNYGRKVAFALSIAFMT 107
Query: 438 LCWVLK-LSSMETWA--LVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSV 593
L ++ L+S ++ L+ R + + S LY +EIS S+RG + S+
Sbjct: 108 LAGAMQMLASFTPYSEVLIAGRLIAAVFSPLSDAALILYLQEISPSSLRGTMSSL 162
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 601 CSTARATCSCTWWATCSRTAPCCGC 675
C T TC CT TC R CCGC
Sbjct: 82 CCTCCRTCCCTRCCTCCRPC-CCGC 105
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
CG C C R C CT TC T CC C
Sbjct: 64 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTR-CCTC 97
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 601 CSTARATCSCTWWATCSRTAPCCGC 675
C T TC CT TC R CCGC
Sbjct: 84 CCTCCRTCCCTRCCTCCRPC-CCGC 107
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
CG C C R C CT TC T CC C
Sbjct: 66 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTR-CCTC 99
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 601 CSTARATCSCTWWATCSRTAPCCGC 675
C T TC CT TC R CCGC
Sbjct: 87 CCTCCRTCCCTRCCTCCRPC-CCGC 110
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 571 CGVCSAAW*HCSTARATCSCTWWATCSRTAPCCGC 675
CG C C R C CT TC T CC C
Sbjct: 69 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTR-CCTC 102
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 306 TDGEVSWMGAAAYLTCVPADYFMAFLGDRVGRKPAL---LFVSSVAVLCWVLKLS 461
T + +W+ A L +P FL DR+GR+P + + VS V++L ++ ++
Sbjct: 352 TYSQATWLSFATGLLRLPFTLVPVFLVDRLGRRPLIIVSMLVSFVSILVMIIAIN 406
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +3
Query: 342 YLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAG 521
Y+ + + + ++ D++GRK + + + L + A + RAL GI +AG
Sbjct: 116 YVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAG 175
Query: 522 SYVTCPLYTKEI 557
+ + Y E+
Sbjct: 176 TMIVGWAYFSEL 187
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = +3
Query: 369 FMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYT 548
FM+ L DR GRKP ++ + +A L + S ++ RA +G + T
Sbjct: 163 FMSMLADRYGRKPIIVTTAILAFLANMAASFSPNFAIFLILRAFIGACSDSYLSVASVAT 222
Query: 549 KEISEDSVRGLLGSVVTLFHCAGNLFLYVV 638
E + R + V + G ++ +V
Sbjct: 223 CEYLSEKARAWITVVYNVAWSLGMVWTLLV 252
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +3
Query: 333 AAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWAL---VLARALV 503
AA +L + A M+ L R G + +S + V+ + TW+ V+ R L
Sbjct: 107 AAGFLGAIAAVVPMSRLTARFGVHKVMT-LSGILGTFLVVITPIVITWSFPVFVILRVLQ 165
Query: 504 GITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVL 650
GIT+A + T + E + + +GL SV++ G +F V L
Sbjct: 166 GITLANLFTTAGVVVNEWAAVNEKGLFISVLSAHVEMGAVFTMPVSGAL 214
>U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical
protein C03B1.13 protein.
Length = 436
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 480 LVLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVG--DVLP 653
L + R ++G+ S PLY EIS R L + + L V+G ++LP
Sbjct: 58 LSIGRLMIGLQAGSSLCLLPLYIIEISPAHYRSFLNNFQQVSQSFATLLGLVLGSEEILP 117
Query: 654 YRAVLWLCLALPTLHLVLFM 713
+ + + + + +LF+
Sbjct: 118 LGSSRFFIMQISAVIPILFL 137
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +1
Query: 535 VRSTPKRSARTPCGVCSAAW*HCSTARATCSCTWWATCSRTAP---CCGC 675
+ +T R R CG S CS +AT + +C TAP C C
Sbjct: 17 IEATSIRDKRQSCGCASQVQPSCSCQQATQPQQYSCSCQNTAPVQTSCSC 66
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +3
Query: 318 VSWMGAAAYLTCVPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETW-----AL 482
VS G A + C+ F G K L+ +++V ++ L L + W A
Sbjct: 88 VSSQGVGALIGCLIVSPISKF-----GAKDVLMRLNNVILIAGSL-LMFLSYWITFPIAF 141
Query: 483 VLARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGN 620
++ R L G+ + PLY ++I +++G + + + C G+
Sbjct: 142 IVGRILTGVYTGLACAFAPLYLQQIIPKNIKGSMSCFLHIAVCFGS 187
>U09277-1|AAC13764.1| 532|Caenorhabditis elegans UNC-17 protein.
Length = 532
Score = 28.7 bits (61), Expect = 4.4
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Frame = +3
Query: 315 EVSWMGAAAYLTCVPADYFMAFLGDRVGRK-PALLFVSSVAVLCWVLKLSSMETWALVLA 491
E+ W+ A+ L + + F ++ DRVG + P +L + ++ + L L+ A
Sbjct: 101 ELGWLFASKALLQIFVNPFSGYIIDRVGYEIPMILGLCTMFFSTAIFALGK-SYGVLLFA 159
Query: 492 RALVGITMA-----GSYVTCPLYTKEISEDSVRGLLGSVVTLFHCA-----GNLFLYVVG 641
R+L G A G + +T+E + G+ + ++ F C G++ + G
Sbjct: 160 RSLQGFGSAFADTSGLAMIADRFTEENERSAALGIALAFIS-FGCLVAPPFGSVLYSLAG 218
Query: 642 DVLPYRAVLWLCLA 683
+P+ + ++CLA
Sbjct: 219 KPVPFLILSFVCLA 232
>L19621-1|AAC14456.1| 532|Caenorhabditis elegans acetylcholine
transporter protein.
Length = 532
Score = 28.7 bits (61), Expect = 4.4
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Frame = +3
Query: 315 EVSWMGAAAYLTCVPADYFMAFLGDRVGRK-PALLFVSSVAVLCWVLKLSSMETWALVLA 491
E+ W+ A+ L + + F ++ DRVG + P +L + ++ + L L+ A
Sbjct: 101 ELGWLFASKALLQIFVNPFSGYIIDRVGYEIPMILGLCTMFFSTAIFALGK-SYGVLLFA 159
Query: 492 RALVGITMA-----GSYVTCPLYTKEISEDSVRGLLGSVVTLFHCA-----GNLFLYVVG 641
R+L G A G + +T+E + G+ + ++ F C G++ + G
Sbjct: 160 RSLQGFGSAFADTSGLAMIADRFTEENERSAALGIALAFIS-FGCLVAPPFGSVLYSLAG 218
Query: 642 DVLPYRAVLWLCLA 683
+P+ + ++CLA
Sbjct: 219 KPVPFLILSFVCLA 232
>AF036701-4|AAB88371.1| 532|Caenorhabditis elegans Uncoordinated
protein 17, isoform a protein.
Length = 532
Score = 28.7 bits (61), Expect = 4.4
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Frame = +3
Query: 315 EVSWMGAAAYLTCVPADYFMAFLGDRVGRK-PALLFVSSVAVLCWVLKLSSMETWALVLA 491
E+ W+ A+ L + + F ++ DRVG + P +L + ++ + L L+ A
Sbjct: 101 ELGWLFASKALLQIFVNPFSGYIIDRVGYEIPMILGLCTMFFSTAIFALGK-SYGVLLFA 159
Query: 492 RALVGITMA-----GSYVTCPLYTKEISEDSVRGLLGSVVTLFHCA-----GNLFLYVVG 641
R+L G A G + +T+E + G+ + ++ F C G++ + G
Sbjct: 160 RSLQGFGSAFADTSGLAMIADRFTEENERSAALGIALAFIS-FGCLVAPPFGSVLYSLAG 218
Query: 642 DVLPYRAVLWLCLA 683
+P+ + ++CLA
Sbjct: 219 KPVPFLILSFVCLA 232
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +3
Query: 381 LGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEIS 560
+ D VGRKP +F S+ +L + + L+ R +G+++ G+ V + E+
Sbjct: 105 VSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGGTLVVVCTFVMEML 164
Query: 561 EDSVRGLLGSVVTLFHCAGNLFLYVVGDVLP-YRAVLWLC--LALPTLHLVLFM 713
R L + L + ++ LP +R C ALP L +++F+
Sbjct: 165 LPQQRMALRAFFN--WGVARLMMTLIAMALPEWRMSSIACAVAALPALIIIVFV 216
>Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 492 RALVGITMAGSYVTCPLYTKEISEDSVRG-LLGSVVTL 602
R + I M+G+Y LY+ E+SED G L +V L
Sbjct: 287 RKIKKIVMSGTYWALSLYSTELSEDETTGYFLSGLVEL 324
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 28.3 bits (60), Expect = 5.9
Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Frame = +3
Query: 312 GEVSWMGAAA---YLTC-VPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA 479
G+ SW+ + Y+ + F+ L D GR P +FV++V ++ +S+ T
Sbjct: 67 GDASWLAESTTTFYMVGNMIGGMFIPPLADHYGRLP--VFVATVLLMAVGGMISAFSTSI 124
Query: 480 LV--LARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLP 653
++ + R + GI + + + E + +R + G FL ++ +LP
Sbjct: 125 MMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTSVYFGVMWVVGACFLGLLAYILP 184
Query: 654 YRAVLWLCLALPTLH--LVLFMAMP 722
L C+++P + L+++M +P
Sbjct: 185 DWRYLMFCISVPNIFVALLIYMTVP 209
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 28.3 bits (60), Expect = 5.9
Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Frame = +3
Query: 312 GEVSWMGAAA---YLTC-VPADYFMAFLGDRVGRKPALLFVSSVAVLCWVLKLSSMETWA 479
G+ SW+ + Y+ + F+ L D GR P +FV++V ++ +S+ T
Sbjct: 87 GDASWLAESTTTFYMVGNMIGGMFIPPLADHYGRLP--VFVATVLLMAVGGMISAFSTSI 144
Query: 480 LV--LARALVGITMAGSYVTCPLYTKEISEDSVRGLLGSVVTLFHCAGNLFLYVVGDVLP 653
++ + R + GI + + + E + +R + G FL ++ +LP
Sbjct: 145 MMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTSVYFGVMWVVGACFLGLLAYILP 204
Query: 654 YRAVLWLCLALPTLH--LVLFMAMP 722
L C+++P + L+++M +P
Sbjct: 205 DWRYLMFCISVPNIFVALLIYMTVP 229
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 126 SFSLIMKSYYFFFREGSKINQILCA 200
S+S KS+Y FF + KI ++LC+
Sbjct: 253 SWSQFRKSWYMFFYQNEKIPEMLCS 277
>AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 492 RALVGITMAGSYVTCPLYTKEISEDSVRG-LLGSVVTL 602
R + I M+G+Y LY+ E+SED G L +V L
Sbjct: 287 RKIKKIVMSGTYWALSLYSTELSEDETTGYFLSGLVEL 324
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +3
Query: 381 LGDRVGRKPALLFVSSVAVLCWVLKLSSMETWALVLARALVGITMAGSYVTCPLYTKEIS 560
+ D VGRKP +F S+ +L + + L+ R +G+++ G+ V + E+
Sbjct: 105 VSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGGTLVVVCTFVMEML 164
Query: 561 EDSVRGLLGSVVTLFHCAGNLFLYVVGDVLP-YRAVLWLC--LALPTLHLVLFM 713
R L + L + ++ LP +R C ALP L +++F+
Sbjct: 165 LPQQRMALRAFFN--WGVARLMMTLIAMALPEWRMSSIACAVAALPALIIIVFV 216
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +1
Query: 535 VRSTPKRSARTPCGVCSAAW*HCSTARATCSCTWWATCSRTAP---CCGC 675
V ++ R R CG S CS +AT + +C TAP C C
Sbjct: 18 VEASSIRDKRQSCGCASQVQPSCSCQQATQPQQYSCSCQNTAPVQTSCSC 67
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 7.8
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = -3
Query: 676 HSHSTARYGSTSPTTYRNRLP----AQWNNVTTLPSRPRTESSLI-SLV*SGQVT*LPAI 512
++ S++ G+TSP T ++ P + + TT+ TES+++ S SG LP+
Sbjct: 470 YTPSSSTAGATSPATQQSTKPTIGTSMSSGPTTVAPGASTESTVLQSSTPSGTTVTLPSG 529
Query: 511 VMPTRARASTSAH--VSIDDSFSTQHRTATEETNRSAGFLPTLSPRKA 374
A S A ++ D + T T +T S+ L T SP A
Sbjct: 530 SSTATAGTSPQASTVTTVTDISTVSGSTVTSQTAESS--LSTESPTSA 575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,665,139
Number of Sequences: 27780
Number of extensions: 308800
Number of successful extensions: 1275
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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