Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30l06
         (291 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   111   2e-25
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   111   2e-25
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   111   2e-25
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   111   2e-25
X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   109   4e-25
U35074-1|AAC13917.1|  550|Drosophila melanogaster CCF protein.         27   5.1  
BT023771-1|AAZ41779.1|  550|Drosophila melanogaster LD47601p pro...    27   5.1  
AE014297-178|AAF52073.1|  550|Drosophila melanogaster CG2530-PA ...    27   5.1  
AE014298-763|AAF46053.2|  279|Drosophila melanogaster CG15777-PA...    26   9.0  

>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  111 bits (266), Expect = 2e-25
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +2

Query: 5   RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTP 184
           RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF              LTP
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTP 236

Query: 185 DLWRDIPLTKSPYSEF 232
           DLW+++PL  +PY  +
Sbjct: 237 DLWKEMPLGSTPYQAY 252


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  111 bits (266), Expect = 2e-25
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +2

Query: 5   RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTP 184
           RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF              LTP
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTP 236

Query: 185 DLWRDIPLTKSPYSEF 232
           DLW+++PL  +PY  +
Sbjct: 237 DLWKEMPLGSTPYQAY 252


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  111 bits (266), Expect = 2e-25
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +2

Query: 5   RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTP 184
           RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF              LTP
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTP 236

Query: 185 DLWRDIPLTKSPYSEF 232
           DLW+++PL  +PY  +
Sbjct: 237 DLWKEMPLGSTPYQAY 252


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  111 bits (266), Expect = 2e-25
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +2

Query: 5   RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTP 184
           RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF              LTP
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTP 236

Query: 185 DLWRDIPLTKSPYSEF 232
           DLW+++PL  +PY  +
Sbjct: 237 DLWKEMPLGSTPYQAY 252


>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  109 bits (263), Expect = 4e-25
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = +2

Query: 5   RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTP 184
           RLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGSTGTLGNF              LTP
Sbjct: 177 RLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTP 236

Query: 185 DLWRDIPLTKSPYSEF 232
           DLW+++PL  +PY  +
Sbjct: 237 DLWKEMPLGSTPYQAY 252


>U35074-1|AAC13917.1|  550|Drosophila melanogaster CCF protein.
          Length = 550

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -2

Query: 131 NFPRCQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQE 12
           N+    L+H ++  + + Q  ++   + +QTQ Q+H  Q+
Sbjct: 9   NYDMSSLSHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQ 48


>BT023771-1|AAZ41779.1|  550|Drosophila melanogaster LD47601p
           protein.
          Length = 550

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -2

Query: 131 NFPRCQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQE 12
           N+    L+H ++  + + Q  ++   + +QTQ Q+H  Q+
Sbjct: 9   NYDMSSLSHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQ 48


>AE014297-178|AAF52073.1|  550|Drosophila melanogaster CG2530-PA
           protein.
          Length = 550

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -2

Query: 131 NFPRCQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQE 12
           N+    L+H ++  + + Q  ++   + +QTQ Q+H  Q+
Sbjct: 9   NYDMSSLSHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQ 48


>AE014298-763|AAF46053.2|  279|Drosophila melanogaster CG15777-PA
           protein.
          Length = 279

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 14  PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 112
           P P  +G  S+PV ++ L MAGV     +  GS
Sbjct: 115 PPPPDSGSSSSPVDRRRLFMAGVAPPIAAGAGS 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,563,318
Number of Sequences: 53049
Number of extensions: 267532
Number of successful extensions: 685
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)