Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30l06
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   1.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   1.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   1.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   1.8  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   2.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   5.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    19   9.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    19   9.4  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 147 TLPLPRHMP 173
           TLPLP+H+P
Sbjct: 503 TLPLPQHLP 511


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 147 TLPLPRHMP 173
           TLPLP+H+P
Sbjct: 418 TLPLPQHLP 426


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 147 TLPLPRHMP 173
           TLPLP+H+P
Sbjct: 737 TLPLPQHLP 745


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 116 QLNHELTCSNPVHQPSEEAS*ELAQTQY-QYHE 21
           Q++H++   +P  QP +      AQ Q+ Q HE
Sbjct: 167 QMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHE 199


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 156 LPRHMPTSL 182
           LP+H+PTSL
Sbjct: 379 LPKHLPTSL 387


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 224 SEFKV*DSHCITTE 265
           SE K  + HC+TTE
Sbjct: 814 SEEKNINDHCVTTE 827


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 154 HCQDICLP 177
           HC  +CLP
Sbjct: 42  HCSHLCLP 49


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 154 HCQDICLP 177
           HC  +CLP
Sbjct: 42  HCSHLCLP 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,564
Number of Sequences: 438
Number of extensions: 1495
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)