Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30k19
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U91326-1|AAC27674.1|  913|Homo sapiens eIF-3 p110 subunit protein.     32   2.0  
U46025-1|AAD03462.1|  913|Homo sapiens translation intiation fac...    32   2.0  
BC071705-1|AAH71705.1|  913|Homo sapiens eukaryotic translation ...    32   2.0  
BC001571-1|AAH01571.1|  913|Homo sapiens eukaryotic translation ...    32   2.0  
AY762099-1|AAX07826.1|  913|Homo sapiens cell migration-inducing...    32   2.0  
AK000739-1|BAA91352.1|  913|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AC002544-1|AAC27426.1|  913|Homo sapiens Translation initiation ...    32   2.0  

>U91326-1|AAC27674.1|  913|Homo sapiens eIF-3 p110 subunit protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


>U46025-1|AAD03462.1|  913|Homo sapiens translation intiation factor
           eIF-3 p110 subunit protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


>BC071705-1|AAH71705.1|  913|Homo sapiens eukaryotic translation
           initiation factor 3, subunit C protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


>BC001571-1|AAH01571.1|  913|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 8, 110kDa protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


>AY762099-1|AAX07826.1|  913|Homo sapiens cell migration-inducing
           protein 17 protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


>AK000739-1|BAA91352.1|  913|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20732 fis, clone HEP08682. ).
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


>AC002544-1|AAC27426.1|  913|Homo sapiens Translation initiation
           factor eIF-p110 protein.
          Length = 913

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = -2

Query: 310 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 146
           D  F + +  VGE I+   + L+N    + V  C+ +L+ER  E F  +M+N  P     
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469

Query: 145 VHRVSNDHVVCA 110
           V  + ++  VCA
Sbjct: 470 VEHLKDEAQVCA 481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,069,466
Number of Sequences: 237096
Number of extensions: 1865269
Number of successful extensions: 3395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3395
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)