Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30k16
         (224 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060398-1|AAL25437.1|  422|Drosophila melanogaster LD31834p pro...    26   8.2  
AE014296-2305|AAF49798.2|  422|Drosophila melanogaster CG12478-P...    26   8.2  
AE014296-2304|AAF49799.2|  363|Drosophila melanogaster CG12478-P...    26   8.2  

>AY060398-1|AAL25437.1|  422|Drosophila melanogaster LD31834p
           protein.
          Length = 422

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 AQSTLGYLHGSXPLPGTRSGLL 219
           AQS +  LHGS  +PG  S L+
Sbjct: 108 AQSAITNLHGSQTMPGASSSLV 129


>AE014296-2305|AAF49798.2|  422|Drosophila melanogaster CG12478-PA,
           isoform A protein.
          Length = 422

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 AQSTLGYLHGSXPLPGTRSGLL 219
           AQS +  LHGS  +PG  S L+
Sbjct: 108 AQSAITNLHGSQTMPGASSSLV 129


>AE014296-2304|AAF49799.2|  363|Drosophila melanogaster CG12478-PB,
           isoform B protein.
          Length = 363

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 AQSTLGYLHGSXPLPGTRSGLL 219
           AQS +  LHGS  +PG  S L+
Sbjct: 49  AQSAITNLHGSQTMPGASSSLV 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,007,732
Number of Sequences: 53049
Number of extensions: 145858
Number of successful extensions: 412
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 24,988,368
effective HSP length: 54
effective length of database: 22,123,722
effective search space used: 442474440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)