Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30k12
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ228141-1|ABB17070.1|  838|Homo sapiens skeletal muscle cells r...   210   4e-54
BC030520-1|AAH30520.1|   91|Homo sapiens FAM91A1 protein protein.      97   4e-20
BC018933-1|AAH18933.2|  931|Homo sapiens MYH14 protein protein.        30   7.2  
AY165122-1|AAO39147.1| 1995|Homo sapiens myosin heavy chain prot...    30   7.2  

>DQ228141-1|ABB17070.1|  838|Homo sapiens skeletal muscle cells
           re-entry induced protein.
          Length = 838

 Score =  210 bits (512), Expect = 4e-54
 Identities = 92/182 (50%), Positives = 133/182 (73%)
 Frame = +2

Query: 56  MEEEIEDCIRKKIHWAQLPQTVRKLLGDSPKEYDRHIFEFSIKNQLRYRGSLVRTVKKDE 235
           M  ++E  IR    W +LP  VR+ LG+S +EY++ +  +SI+NQLRYR +LV+ VKKDE
Sbjct: 1   MNIDVEFHIRHNYPWNKLPANVRQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDE 60

Query: 236 KKYYEVLVQNSIQKLMLYPYHLADMIIKGLRITPFIYYVEVVALLIELEKSYDTMPNFTA 415
           ++YYE L++ S   LMLYPYHL+D+++KGLRITPF YY  ++  ++  EKSYD++PNFTA
Sbjct: 61  RRYYEELLKYSRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTA 120

Query: 416 ADCLRLLGIGRNEYLELVAKARSLGRRGRSKAIRSLLPRVPXNVPMQPWWXIELGYVLEE 595
           ADCLRLLGIGRN+Y++L+ + RS  +  R K  R LLP  P  + ++ WW ++ GY+ E+
Sbjct: 121 ADCLRLLGIGRNQYIDLMNQCRSSKKFFRRKTARDLLPIKPVEIAIEAWWVVQAGYITED 180

Query: 596 DV 601
           D+
Sbjct: 181 DI 182


>BC030520-1|AAH30520.1|   91|Homo sapiens FAM91A1 protein protein.
          Length = 91

 Score = 97.1 bits (231), Expect = 4e-20
 Identities = 43/86 (50%), Positives = 63/86 (73%)
 Frame = +2

Query: 56  MEEEIEDCIRKKIHWAQLPQTVRKLLGDSPKEYDRHIFEFSIKNQLRYRGSLVRTVKKDE 235
           M  ++E  IR    W +LP  VR+ LG+S +EY++ +  +SI+NQLRYR +LV+ VKKDE
Sbjct: 1   MNIDVEFHIRHNYPWNKLPANVRQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDE 60

Query: 236 KKYYEVLVQNSIQKLMLYPYHLADMI 313
           ++YYE L++ S   LMLYPYHL+D++
Sbjct: 61  RRYYEELLKYSRDHLMLYPYHLSDIV 86


>BC018933-1|AAH18933.2|  931|Homo sapiens MYH14 protein protein.
          Length = 931

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
 Frame = +2

Query: 254 LVQNSIQKLMLYPYHLADMIIKGLRITPFIYYVEVVALLIELEKSYDTMPNFTAADCL-R 430
           L Q +++ L +  +   + II  LR+   +     +AL  E      TMP+ TAA  L R
Sbjct: 277 LFQETLESLRVLGFSHEE-IISMLRMVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCR 335

Query: 431 LLGIGRNEYLELVAKAR-SLGRRGRSKA 511
           LLG+G  ++   +   R  +GR    KA
Sbjct: 336 LLGLGVTDFSRALLTPRIKVGRDYVQKA 363


>AY165122-1|AAO39147.1| 1995|Homo sapiens myosin heavy chain
           protein.
          Length = 1995

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
 Frame = +2

Query: 254 LVQNSIQKLMLYPYHLADMIIKGLRITPFIYYVEVVALLIELEKSYDTMPNFTAADCL-R 430
           L Q +++ L +  +   + II  LR+   +     +AL  E      TMP+ TAA  L R
Sbjct: 344 LFQETLESLRVLGFSHEE-IISMLRMVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCR 402

Query: 431 LLGIGRNEYLELVAKAR-SLGRRGRSKA 511
           LLG+G  ++   +   R  +GR    KA
Sbjct: 403 LLGLGVTDFSRALLTPRIKVGRDYVQKA 430


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,708,090
Number of Sequences: 237096
Number of extensions: 1512199
Number of successful extensions: 2807
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2807
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)