Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30k12
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical pr...   202   2e-52
AC024753-11|AAF60461.1|  369|Caenorhabditis elegans Hypothetical...    31   0.48 
AC024819-4|AAU20828.1|  469|Caenorhabditis elegans Hypothetical ...    30   1.1  
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z93393-17|CAB07693.2|  751|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr prote...    29   1.9  
Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF039051-10|AAB94259.3|  313|Caenorhabditis elegans Serpentine r...    28   4.5  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical
           protein F33H2.2 protein.
          Length = 816

 Score =  202 bits (492), Expect = 2e-52
 Identities = 89/180 (49%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
 Frame = +2

Query: 65  EIEDCIRKKIHWAQLPQTVRKLLGDSPKEYDRHIFEFSIKNQLRYRGSLVRTVKKDEKKY 244
           EI+DCIR  I WA L   ++ +LG+S KEY++ + E+SI+NQLRY+G+L+R +KK E+ Y
Sbjct: 2   EIDDCIRDNIPWANLSPDIKVILGNSSKEYEKRVLEYSIQNQLRYKGNLIRHMKKSEEAY 61

Query: 245 YEVLVQNSIQKLMLYPYHLADMIIKGLRITPFIYYVEVVALLIELEKSYDTMPNFTAADC 424
           YE L++ S   LMLYPYHL+D+ +  +R++PF YY  ++  ++  EKSYD++PNFTAAD 
Sbjct: 62  YEQLLRFSESHLMLYPYHLSDITVTEMRLSPFSYYANILTEMLNTEKSYDSLPNFTAADA 121

Query: 425 LRLLGIGRNEYLELVAKARSLGR-RGRSKAIRSLLPRVPXNVPMQPWWXIELGYVLEEDV 601
           +RLLGIGRN+Y+EL+ + RS  +   RSK+ R LLP+ P  + ++ WW   +G +LE DV
Sbjct: 122 VRLLGIGRNQYIELMNQTRSNRKFLRRSKSARELLPQKPTKMIVESWWRTNVGSILESDV 181


>AC024753-11|AAF60461.1|  369|Caenorhabditis elegans Hypothetical
           protein Y23H5B.1 protein.
          Length = 369

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = -2

Query: 361 HHFYIINKWGYP*SFNDHIS*VIGVEHKLLYAVLHKNLIVFLLVFLNR 218
           H+FYII    Y    +D +  ++  EHK+   + + ++IVF++VFL R
Sbjct: 310 HYFYIIQ---YEEGDDDEVDEIMRREHKINKWLYNISMIVFIIVFLAR 354


>AC024819-4|AAU20828.1|  469|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3b protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 47  ILKMEEEIED---CIRKKIHWAQ-LPQTVRKLLGDSPKEYDRHIF 169
           +LK+ E IE+    +R  + +AQ  P+ +RKL+  S K  + H F
Sbjct: 135 VLKLAENIEEIMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYF 179


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 47  ILKMEEEIED---CIRKKIHWAQ-LPQTVRKLLGDSPKEYDRHIF 169
           +LK+ E IE+    +R  + +AQ  P+ +RKL+  S K  + H F
Sbjct: 589 VLKLAENIEEIMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYF 633


>Z93393-17|CAB07693.2|  751|Caenorhabditis elegans Hypothetical
           protein Y48E1B.7 protein.
          Length = 751

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 314 IKGLRITPFIYYVEVVALLIELEKSYDTMPNFTAADCLRLLGIGRNEY 457
           I  +R+T +I  +E  A LIE  +   + P   A D + ++GI   +Y
Sbjct: 616 INPIRVTSYIRMMEEEARLIERTRQAASAPGAAAGDEIDVVGIDEEDY 663


>Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical
           protein C41C4.4 protein.
          Length = 967

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 86  KKIHWAQLPQTVRKLLGDSPKEY 154
           KK H+ +LP+ VR+ LGD P ++
Sbjct: 853 KKHHYRELPEDVRQSLGDIPDQF 875


>AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr protein
           kinase protein.
          Length = 967

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 86  KKIHWAQLPQTVRKLLGDSPKEY 154
           KK H+ +LP+ VR+ LGD P ++
Sbjct: 853 KKHHYRELPEDVRQSLGDIPDQF 875


>Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +2

Query: 212 VRTVKKDEKKYYEVLVQNSIQKLMLYPYHLADMIIKGLRITPFIYYVEVVALLIELEKSY 391
           V  +   E +Y+ + V     +   YP+ +A+ II  +    FI Y+E+    I ++K +
Sbjct: 110 VSIISMFENRYFVLFVNRGCWRYFRYPFLVANYII--VITYCFIIYLEIPDQEIAIKKLF 167

Query: 392 DTMPNF 409
              P F
Sbjct: 168 KKYPRF 173


>Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +2

Query: 212 VRTVKKDEKKYYEVLVQNSIQKLMLYPYHLADMIIKGLRITPFIYYVEVVALLIELEKSY 391
           V  +   E +Y+ + V     +   YP+ +A+ II  +    FI Y+E+    I ++K +
Sbjct: 110 VSIISMFENRYFVLFVNRGCWRYFRYPFLVANYII--VITYCFIIYLEIPDQEIAIKKLF 167

Query: 392 DTMPNF 409
              P F
Sbjct: 168 KKYPRF 173


>AF039051-10|AAB94259.3|  313|Caenorhabditis elegans Serpentine
           receptor, class i protein73 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -2

Query: 277 LLYAVLHKNLIVFLLVFLNRSNETAS-ISQLVFYTEFKNVSIVFLRR 140
           L++ V H N+I  +L+    S+ + + IS L+F+  ++ + + FL+R
Sbjct: 264 LIFEVPHVNVIGEILIAWFASHSSINMISLLIFFPPYRKLFVTFLKR 310


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 267 LFCTRTS*Y-FFSSFLTVLTRLPLYLNWFFILNSKMCLSYSF 145
           +FC R     FF SFL+  T   + L WFF+ +S M   +SF
Sbjct: 32  VFCARKKKKRFFLSFLSFSTCCSI-LGWFFLSHSTMHTYFSF 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,350,774
Number of Sequences: 27780
Number of extensions: 241329
Number of successful extensions: 624
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)