Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30k06
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050411-1|AAH50411.1| 349|Homo sapiens phosphotriesterase rela... 171 3e-42
BC015092-1|AAH15092.1| 349|Homo sapiens phosphotriesterase rela... 171 3e-42
AL360230-2|CAH73146.1| 349|Homo sapiens phosphotriesterase rela... 171 3e-42
AF212237-1|AAK14923.1| 349|Homo sapiens HPHRP protein. 171 3e-42
AB209629-1|BAD92866.1| 843|Homo sapiens myosin VIIA variant pro... 31 3.0
X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA... 30 7.0
CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein. 30 7.0
BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal... 30 7.0
>BC050411-1|AAH50411.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 171 bits (415), Expect = 3e-42
Identities = 86/218 (39%), Positives = 132/218 (60%)
Frame = +1
Query: 40 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 219
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 220 RQFPYSSKGNLVLNDQAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYKLVSEKSD 399
++ YS K NL LN + EA+ +++ +K GGG +VEN+T G+ RD K ++E++
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETG 118
Query: 400 VNIVAGTGFYVEDVQAKANLSKTTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLR 579
V+I++G GFYV+ + + + EQ+ ++ E+ G + S+K G +GEI WPL
Sbjct: 119 VHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLT 177
Query: 580 EFERRAIVAAGELQPQVGCGVSFHPHRAIEAPFEIIRL 693
E ER+ + A Q Q+GC V HP R+ APF+IIR+
Sbjct: 178 ESERKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRI 215
>BC015092-1|AAH15092.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 171 bits (415), Expect = 3e-42
Identities = 86/218 (39%), Positives = 132/218 (60%)
Frame = +1
Query: 40 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 219
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 220 RQFPYSSKGNLVLNDQAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYKLVSEKSD 399
++ YS K NL LN + EA+ +++ +K GGG +VEN+T G+ RD K ++E++
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETG 118
Query: 400 VNIVAGTGFYVEDVQAKANLSKTTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLR 579
V+I++G GFYV+ + + + EQ+ ++ E+ G + S+K G +GEI WPL
Sbjct: 119 VHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLT 177
Query: 580 EFERRAIVAAGELQPQVGCGVSFHPHRAIEAPFEIIRL 693
E ER+ + A Q Q+GC V HP R+ APF+IIR+
Sbjct: 178 ESERKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRI 215
>AL360230-2|CAH73146.1| 349|Homo sapiens phosphotriesterase related
protein.
Length = 349
Score = 171 bits (415), Expect = 3e-42
Identities = 86/218 (39%), Positives = 132/218 (60%)
Frame = +1
Query: 40 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 219
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 220 RQFPYSSKGNLVLNDQAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYKLVSEKSD 399
++ YS K NL LN + EA+ +++ +K GGG +VEN+T G+ RD K ++E++
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETG 118
Query: 400 VNIVAGTGFYVEDVQAKANLSKTTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLR 579
V+I++G GFYV+ + + + EQ+ ++ E+ G + S+K G +GEI WPL
Sbjct: 119 VHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLT 177
Query: 580 EFERRAIVAAGELQPQVGCGVSFHPHRAIEAPFEIIRL 693
E ER+ + A Q Q+GC V HP R+ APF+IIR+
Sbjct: 178 ESERKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRI 215
>AF212237-1|AAK14923.1| 349|Homo sapiens HPHRP protein.
Length = 349
Score = 171 bits (415), Expect = 3e-42
Identities = 86/218 (39%), Positives = 132/218 (60%)
Frame = +1
Query: 40 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 219
++ ++ KV+TVLG V S LGRTLTHEHLAMTF Y PP + + P ++ ++
Sbjct: 1 MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60
Query: 220 RQFPYSSKGNLVLNDQAAKEAVVNDVIAYKKFGGGTIVENSTVGLDRDVNFYKLVSEKSD 399
++ YS K NL LN + EA+ +++ +K GGG +VEN+T G+ RD K ++E++
Sbjct: 61 QKNAYSHKENLQLNQET--EAIKEELLYFKANGGGALVENTTTGISRDTQTLKRLAEETG 118
Query: 400 VNIVAGTGFYVEDVQAKANLSKTTEQMYHHMLTELTTGFLEEPSVKAGFMGEIASVWPLR 579
V+I++G GFYV+ + + + EQ+ ++ E+ G + S+K G +GEI WPL
Sbjct: 119 VHIISGAGFYVDATHSSETRAMSVEQLTDVLMNEILHG-ADGTSIKCGIIGEIGCSWPLT 177
Query: 580 EFERRAIVAAGELQPQVGCGVSFHPHRAIEAPFEIIRL 693
E ER+ + A Q Q+GC V HP R+ APF+IIR+
Sbjct: 178 ESERKVLQATAHAQAQLGCPVIIHPGRSSRAPFQIIRI 215
>AB209629-1|BAD92866.1| 843|Homo sapiens myosin VIIA variant
protein.
Length = 843
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 124 LAMTFTHFYREPPKQIVDVFENPFCLEKSGFLRQFPYSSKGNLVLNDQAAKEAVVN 291
L +TF R+ K +V + +NP E+SGFL +KG+L++ D E V+N
Sbjct: 209 LVVTFLEGLRKRSKYVVALQDNPNPGEESGFLS----FAKGDLIILDHDTGEQVMN 260
>X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA
for ribosomal protein L3 homologue ( MRL3 = mammalian
ribosome L3 ). ).
Length = 348
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 46 KMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYRE---PPKQIVDVF 183
K TSK +SV G+T++ A + FYRE PPKQ V +F
Sbjct: 131 KYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIF 179
>CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein.
Length = 348
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 46 KMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYRE---PPKQIVDVF 183
K TSK +SV G+T++ A + FYRE PPKQ V +F
Sbjct: 131 KYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIF 179
>BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal
protein L3 protein.
Length = 348
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 46 KMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYRE---PPKQIVDVF 183
K TSK +SV G+T++ A + FYRE PPKQ V +F
Sbjct: 131 KYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIF 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,700,721
Number of Sequences: 237096
Number of extensions: 2296831
Number of successful extensions: 7776
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7767
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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