Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30i16
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41279-13|AAQ81281.1|   86|Caenorhabditis elegans Insulin relate...    29   2.7  
U13875-1|AAA21162.2|  541|Caenorhabditis elegans Yeast ula (ubiq...    29   4.7  
AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical...    29   4.7  

>U41279-13|AAQ81281.1|   86|Caenorhabditis elegans Insulin related
           protein 12 protein.
          Length = 86

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 489 EFQQKMIRKCCTNPCTVAELMYLC 560
           EF +    KCC + C ++E+M LC
Sbjct: 51  EFLRNSATKCCQDNCEISEMMALC 74


>U13875-1|AAA21162.2|  541|Caenorhabditis elegans Yeast ula
           (ubiquitin activating)homolog protein 1 protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 11  VADVVTESELRAEFDELYLIDKNNKKSQDITSNFFTHAD 127
           +A  + +S + A     Y++D    +  DI  NFF HAD
Sbjct: 38  LATEILKSLVLAGVQSFYVVDDAKVEQADIGQNFFLHAD 76


>AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.10 protein.
          Length = 986

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 23  VTESELRAEFDELYLIDKNNKKSQDITSNFFTHA 124
           VT+ E     D+L+++ K N+KS+D   + F +A
Sbjct: 409 VTKDEKEETIDDLFVVRKQNQKSEDDQEDGFGYA 442


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,433,077
Number of Sequences: 27780
Number of extensions: 318133
Number of successful extensions: 645
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)