Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30i15
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 48 1e-06
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 46 7e-06
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 44 3e-05
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 42 8e-05
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 41 2e-04
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 41 2e-04
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 40 3e-04
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 40 3e-04
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 38 0.001
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 38 0.001
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 30 0.36
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 29 0.48
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.5
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 4.5
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 26 4.5
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 26 5.9
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 26 5.9
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 5.9
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 5.9
SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2 |Schizosacc... 25 7.9
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 25 7.9
SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 25 7.9
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 48.4 bits (110), Expect = 1e-06
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Frame = +1
Query: 262 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPIL-ILVARFLAGISGGGLLVMAPIF 438
I G L + GRK I + ++ +IV++++ + ++V RF+ G G ++ P++
Sbjct: 146 IAGALADFFGRKPV-IAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLY 204
Query: 439 ISXIADDSIRGALASSPLFLYCVGVLLSYIIGW-FSTYH----VIIWISLXLSVTGVFLF 603
+S IA IRG L + L G +++Y I F H ++ +++ + +F+
Sbjct: 205 LSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFEHVHNGWRWMVGLAMVPAAFQLFIL 264
Query: 604 LLSTESPIYYMRKQREEDARASIAR 678
+ ESP ++K+R ++A ++AR
Sbjct: 265 IWLPESPRLLVKKERSQEAYNTLAR 289
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 45.6 bits (103), Expect = 7e-06
Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Frame = +1
Query: 262 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 435
++ L++ +G++ + T+ ++ I+++++ P + I+VA+ G+S G L V+AP
Sbjct: 75 LSSPLMDRIGKRTSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLSIGALSVLAPG 133
Query: 436 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW-ISLXLSVT-GVFLF 603
F S +A +RG + ++ G+ ++ I G + W +S+ +++ G+ F
Sbjct: 134 FQSEVAPADLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIITF 193
Query: 604 L---LSTESPIYYMRKQREEDARASIARYKGL 690
+ ESP Y + R+E+A +A+ L
Sbjct: 194 IGISFLPESPRYLISVGRDEEALQIMAKNNDL 225
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 43.6 bits (98), Expect = 3e-05
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 331 LSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYC 504
++ IV+L++ P + ++VA+ G+ G L V+AP + S + IRGA+ ++
Sbjct: 97 ITGVIVQLTTIPSWVQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFIT 156
Query: 505 VGVLLSYIIGW----FST-----YHVIIWISLXLSVTGVFLFLLSTESPIYYMRKQREED 657
+G+ ++ I ++T + V I I+L + F L ESP Y K R E+
Sbjct: 157 LGIFIAACINMGTHKYTTHPEAQWRVPIGINLLWGILMFFGMLFLPESPRYLAVKGRNEE 216
Query: 658 ARASIARYKGL 690
+ R GL
Sbjct: 217 CMKILTRNAGL 227
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 41.9 bits (94), Expect = 8e-05
Identities = 32/142 (22%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Frame = +1
Query: 262 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 435
++ L++ +G++ + T+ ++ I+++++ P + I+VA+ G++ G L V+AP
Sbjct: 75 LSSPLMDRIGKRVSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPG 133
Query: 436 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW-ISLXLSVT-GVFLF 603
F S +A ++RG + ++ G+ ++ I G + W +S+ +++ G+ +F
Sbjct: 134 FQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMF 193
Query: 604 L---LSTESPIYYMRKQREEDA 660
+ ESP Y + ++E+A
Sbjct: 194 IGISFLPESPRYLIAIGKDEEA 215
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 40.7 bits (91), Expect = 2e-04
Identities = 32/142 (22%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Frame = +1
Query: 262 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 435
I+ + +G++N I + ++ I+++++ P + I+VA+ G+ G L V+AP
Sbjct: 75 ISSPTTDRIGKRNSIIGFCVIYLIG-VIIQVTAVPSWVQIMVAKIWTGLGIGALSVLAPG 133
Query: 436 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW-ISLXLSVTGVFLFL 606
+ S +A IRG + + G+ ++ I G Y W +S+ +++ + L
Sbjct: 134 YQSEVAPPHIRGTIVVTYQLCVTAGIFIAACINMGTHKLYKTAQWRVSIGINLLWGIITL 193
Query: 607 LS----TESPIYYMRKQREEDA 660
+ +ESP Y + ++++A
Sbjct: 194 VGVSFLSESPRYLVSIGKDDEA 215
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 40.7 bits (91), Expect = 2e-04
Identities = 32/144 (22%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Frame = +1
Query: 262 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 435
++ + + +G++ IV T ++ I+++++ P + ILVA+ G+S G L V+ P
Sbjct: 43 LSSPVADKIGKRLSIIVWTTVYLIG-IIIQVTTVPSWVQILVAKIWTGLSIGALSVITPG 101
Query: 436 FISXIADDSIRGALASSPLFLYCVGVLLS---------YIIGWFSTYHVIIWISLXLSVT 588
+ S +A +RGA+ ++ +G+ ++ Y G + + + I I+L +
Sbjct: 102 YQSEVAPAIMRGAIVTTYQLFITLGIFIAACINMGTHKYSHGTTAQWRISIGINLLWGII 161
Query: 589 GVFLFLLSTESPIYYMRKQREEDA 660
+ + ESP Y + ++++A
Sbjct: 162 TLVGIIFLPESPRYLIAIGKDDEA 185
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 39.9 bits (89), Expect = 3e-04
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Frame = +1
Query: 343 IVELSSSP--ILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVL 516
IV++++ P + I+VA+ GI G L V+AP + S A SIRG + + G+
Sbjct: 105 IVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIF 164
Query: 517 LSYIIGW-------FSTYHVIIWISLXLSVTGVFLFLLSTESPIYYMRKQREEDA 660
++ I + + V I I+L + + L ESP Y ++ ++E+A
Sbjct: 165 IAACINMGTHKLHKTAQWRVSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEA 219
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 39.9 bits (89), Expect = 3e-04
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Frame = +1
Query: 343 IVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRGA-LASSPLFLYCVGVLL 519
+V S I +LV + LAG+ G L V++P + S +A IRGA +A+ +F ++
Sbjct: 103 LVTAVPSWIQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVATYQIFSTGAALVA 162
Query: 520 SYI-IGWFSTYHVIIW-ISLXLSVT-GVFLF---LLSTESPIYYMRKQREEDA 660
+ I +G W S +++ G+ L L ESP Y + K R+E+A
Sbjct: 163 ACINMGTHKLRKTASWRTSFGINMLWGILLMVGVLFLPESPRYLIYKGRDEEA 215
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 38.3 bits (85), Expect = 0.001
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Frame = +1
Query: 265 TGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFIS 444
+G L + +GRK + V+ I+ S + +++V RF+ G G ++ P++I+
Sbjct: 140 SGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYIT 199
Query: 445 XIADDSIRGALASSPLFLYCVGVLLSYII-GWFSTYH----VIIWISLXLSVTGVFLFLL 609
+A +RG L + G L++Y + F H ++ I ++ +
Sbjct: 200 ELAPARLRGRLVIIYVVFITGGQLIAYSLNAAFEHVHQGWRIMFGIGAAPALGQLISLFW 259
Query: 610 STESPIYYMRKQREEDARASIAR 678
+ ESP Y +R E ++R
Sbjct: 260 TPESPRYLLRHNHVEKVYKILSR 282
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 38.3 bits (85), Expect = 0.001
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Frame = +1
Query: 268 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISX 447
G N LGRK + F +L + S + I ++V R + G+ GGG++ + I IS
Sbjct: 152 GVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGGGIISLVNIIISD 211
Query: 448 IADDSIR----GALASSPLFLYCVGVLLSYIIGWFSTYHVIIWISL-----XLSVTGVFL 600
I R G LA++ G ++ I +T+ I +I+L ++ VFL
Sbjct: 212 ITPLRTRPMYSGILATAWGAALVAGPIIGGAICQRTTWRWIFFINLPSGGIATALIVVFL 271
Query: 601 FLLSTE 618
LL E
Sbjct: 272 HLLPCE 277
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 29.9 bits (64), Expect = 0.36
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = +1
Query: 268 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISX 447
G L + GR+ + L +S S + +AR LAGI GGGL M+ I S
Sbjct: 87 GRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIISSD 146
Query: 448 IADDSIRGALASSPLFLYCVGVLLSYIIG 534
I RG ++ +G L +G
Sbjct: 147 IVSLRERGTWQGITNIVWGIGGSLGGPLG 175
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 29.5 bits (63), Expect = 0.48
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 301 GGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRG--- 471
G ++ +FN+ L+ + + + RFLAG + + IS + RG
Sbjct: 118 GNVIFIVFNMACG----LARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPDERGKAV 173
Query: 472 -ALASSPLFLYCVGVLLSYIIGWFSTYHVIIWISLXLSVTGVFLFLLS 612
++ +PL +G ++S I ++TY I W + ++ F+F LS
Sbjct: 174 AVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFWST---TIFSGFIFALS 218
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 373 ILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVLLSYIIGWF 540
++ AR +AGI GGG+ I +S I RG + +G L +G +
Sbjct: 180 LVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIGSSLGGPVGGY 235
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 437 NIGAITSKPPPEIPARNLATRISIGDELSSTMVHDKTLNR 318
N G + +P P P N+ TRI I + S + + +NR
Sbjct: 631 NSGQSSGRPGPLSPNLNVTTRIDIKGKKGSMHLQPRDVNR 670
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 344 MVHDKTLNRVKTIPPF---FLPRLLISVPVMAVPSIAPNDGRLPRRD 213
++H T N T F FL L IS+PV +P+IAP LP +
Sbjct: 380 VMHIPTTNSPLTPQSFTNSFLGYLPISMPVANMPAIAPISVALPENN 426
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 225 AQERRVSFTEWRRQR-GQXGLEELRRVRRPDVGEAHQK*TVATRKRSEHLIQFSFHFHQQ 49
A R++ F++ + R G+ LR++ +V + T+A K EH+I + HQ+
Sbjct: 601 ASPRKLIFSDLPKTRSGKIMRRILRKILAGEVDQIGDLSTLADPKVVEHIIHAVHYAHQK 660
Query: 48 K 46
K
Sbjct: 661 K 661
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 318 SVQCFIMDHSGTKFITDTDPGCEVPSRNL 404
S + F+MD+ GT DP VPS+ L
Sbjct: 563 SKRLFMMDYDGTLTPIVRDPNAAVPSKKL 591
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 5.9
Identities = 23/88 (26%), Positives = 34/88 (38%)
Frame = +1
Query: 289 GRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIR 468
GRK G +V ++L S S I+ RF AG+ G +V + ++ + + R
Sbjct: 120 GRKIGVLVPFFLSILFTIGTASSDSVAAIMCTRFFAGLFAGAPVVSSGGVMADLWCPAQR 179
Query: 469 GALASSPLFLYCVGVLLSYIIGWFSTYH 552
G F G II T H
Sbjct: 180 GTALIFYAFFVVSGADFGPIISSLVTEH 207
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 294 KKWWNRFNSVQCFIMDHSGTKFITDTDPG 380
K W R S F +H ++ + +DPG
Sbjct: 228 KNWKTRIYSFSVFFPEHMDSRVLVQSDPG 256
>SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 143
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 9 YRMWSAVVFCFFFFVGENERKIESGVHFF 95
YR ++ + FCF +N+ I +HFF
Sbjct: 60 YRRYAGLYFCFCVDSTDNDLAILEMIHFF 88
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 84 HLIQFSFHFHQQKKKNRIP 28
HLI+ SF HQ+ K R+P
Sbjct: 265 HLIKISFERHQEFKLERLP 283
>SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 201
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 397 RLGTSQPGSVSVMNLVPLWSMIK 329
+LG S+ G+++V + PLW +K
Sbjct: 127 KLGLSRAGAIAVQDDSPLWKYLK 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,981,893
Number of Sequences: 5004
Number of extensions: 62914
Number of successful extensions: 214
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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