Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30h21
(762 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 40 3e-04
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 38 0.002
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 36 0.005
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 36 0.005
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 35 0.015
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 30 0.41
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 29 0.72
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 5.1
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 5.1
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 26 6.7
SPCC622.04 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 6.7
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 25 8.9
SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces pomb... 25 8.9
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 40.3 bits (90), Expect = 3e-04
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +1
Query: 319 LSENSFTNVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHA 498
+ E SFTN L +E L L +I+ IE S LQ + VL L NKLT K S
Sbjct: 724 IKELSFTNSNLHR---LEELLLGNNEIEEIEEIS--SLQNLMVLQLDNNKLTNLKAS--- 775
Query: 499 FEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQL 618
+P+ +R+L ++ N +H L D F HL L
Sbjct: 776 ----------QPMIHLRILRISNNAIHQLEVDQFPHLRTL 805
Score = 30.7 bits (66), Expect = 0.24
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Frame = +1
Query: 289 LADFKPKIVDLSENSFTNVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNK 468
L++ P I +L+ + + + I +L+ + + SF L ++ LD+SYN+
Sbjct: 621 LSELCPSIEELTLEG-NEIAYLTGCPVTIRDLNAVENRLSSLTSFSNLLNLQYLDISYNQ 679
Query: 469 ---LTAAKLSPHAFEGK------YTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLE 621
LT H E K ++ + + L + L+ N + L+ +L +LE
Sbjct: 680 LEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLSACNNRIKELS-FTNSNLHRLE 738
Query: 622 ELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEI 738
EL + N + I+ ISSL L VL++ + +LT +
Sbjct: 739 ELLLGNNEIEEIEE-----ISSLQNLMVLQLDNNKLTNL 772
Score = 30.7 bits (66), Expect = 0.24
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +1
Query: 319 LSENSFTNVTLM-ADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPH 495
LS N+F + L + L L+ ++ + + +RVLDLS+N ++
Sbjct: 852 LSNNTFVTLDCKHMFLGVRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI----- 906
Query: 496 AFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQ--DLFEHLPQLEELDISGNPL 648
E +PL + L L N + + D+ +L QL LD+ NPL
Sbjct: 907 --------ESLKPLQMIHRLYLVGNRIKKMRNLCDILANLKQLNVLDLRMNPL 951
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 37.5 bits (83), Expect = 0.002
Identities = 39/108 (36%), Positives = 53/108 (49%)
Frame = +1
Query: 427 ELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEH 606
++ ++V++LS N L KL P A K T L MR L+ N + SL+ F
Sbjct: 750 QVSSLKVVNLSSNILEKIKL-PVATSKKLT-RTISQLKIMRTLS--GNPVSSLSSQEFV- 804
Query: 607 LPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEIPEKF 750
+P +EEL + N L D T A+ LKVL + LTEIP KF
Sbjct: 805 MPTVEELYLVDNRLGN-DCFT--ALEYFKCLKVLNLSYNYLTEIPSKF 849
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 529 EPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVL 708
E ++VLNL+YN L + F++ L+ L +SGN L + I+ ++ +L+ L
Sbjct: 827 EYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLS----ISSTAQVLLETL 882
Query: 709 RMRSCQLTEIPE 744
+L+ P+
Sbjct: 883 YANGNRLSSFPK 894
Score = 33.9 bits (74), Expect = 0.025
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +1
Query: 376 LNLSRCKIDVIENASFKELQEMRVLDLSYNKLT---------AAKLSPHAFEGKYTPEQY 528
L++SR ++VI + E+ L++S+N KL +
Sbjct: 410 LDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRG 469
Query: 529 EPLAAMR---VLNLAYNDLHSLNQDLFEHLPQ--LEELDISGNPLTTIDHVT 669
+P+ A+R VLN++ ND++ L+ +F L + L+EL+I+ N L + H T
Sbjct: 470 KPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHST 521
Score = 30.7 bits (66), Expect = 0.24
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Frame = +1
Query: 367 IEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHA---FEGKYT------- 516
+++LNLS + I + F+ +++ L +S N+L +S A E Y
Sbjct: 832 LKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRLSS 891
Query: 517 -PEQYEPLAAMRVLNLAYNDLHSLNQDLFEH-----LPQLEELDISGN 642
P+ ++R L+++ N+L +L + E LPQLE L++SGN
Sbjct: 892 FPKNEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKLPQLEYLNLSGN 939
Score = 26.6 bits (56), Expect = 3.9
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Frame = +1
Query: 364 SIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTA--------AKLSPHAFEGKYTP 519
S++ LN++ K+ + +++ + L + LDLSYN ++L F
Sbjct: 503 SLKELNIANNKLFFLPHST-RYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLS 561
Query: 520 E---QYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSL 690
+ + L ++ L L +NDL + L LE +D+S N +T I ++S
Sbjct: 562 QISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNI-----ASLSEC 616
Query: 691 PMLKVLRMRSCQLTEIPE 744
P L + + +C L E
Sbjct: 617 PKLNSINV-ACNLLSFYE 633
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 36.3 bits (80), Expect = 0.005
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +1
Query: 409 ENASFKELQEMRVLDLSYNKLTA-----AKLS-PHAFEGKYTPEQYEPLAAMRVLNLAYN 570
ENA +L + + +L Y +L A+L+ H F PE + +R LN+ N
Sbjct: 27 ENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILK-FTRLRYLNIRSN 85
Query: 571 DLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEIPEKF 750
L + L L LE LDIS N + + + +L LKVL + +L E+P
Sbjct: 86 VLREFPESLCR-LESLEILDISRNKIKQLPE----SFGALMNLKVLSISKNRLFELPTYI 140
Query: 751 LHTP 762
H P
Sbjct: 141 AHMP 144
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 36.3 bits (80), Expect = 0.005
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Frame = +1
Query: 376 LNLSRCKIDVIENASFKELQEMRVLDLSYNKLT-------------AAKLSPHAFEGKYT 516
L S CK+ I F LQ + LDLS N+LT + L+ + G T
Sbjct: 337 LRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRT 396
Query: 517 PEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTI 657
+ L+ +++L L+ N L SL+ E++P LE+LDI N +T +
Sbjct: 397 -FYHISLSHLQILVLSRNHLTSLSG--LENVPSLEKLDIRDNSITDV 440
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 34.7 bits (76), Expect = 0.015
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 493 HAFEGKYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTI 657
H K++ ++P A+ + N + +L++ FE P L+E D+SG+P I
Sbjct: 578 HNEASKFSHTSFDPKASSKSSNSLKESVEALSEIPFEDAPALDESDLSGDPFWAI 632
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 29.9 bits (64), Expect = 0.41
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +1
Query: 400 DVIENASFKELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAAMRVLNLAYNDLH 579
D+ +F ++ ++ L N++TA ++P GK P ++ L+LA N L
Sbjct: 52 DIRYLGNFPRMKRLQTLLCGNNRITA--IAPDI--GKVLPN-------LKTLSLAQNHLQ 100
Query: 580 SL-NQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVL 708
+ + D PQL L NP+ + L I +P L +L
Sbjct: 101 EIADLDPLASCPQLTNLSCIDNPVAQKQYYRLYLIWRIPSLHIL 144
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 29.1 bits (62), Expect = 0.72
Identities = 34/117 (29%), Positives = 59/117 (50%)
Frame = +1
Query: 364 SIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYEPLAA 543
S+E+L L +I + + SFK LQ ++ L L+ N L+ ++ +G Y + ++
Sbjct: 218 SLEVLYLEANEIILSKATSFKNLQFLQTLSLANN------LNLYSADG-YAVDVFQ---G 267
Query: 544 MRVLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRM 714
+ LNL+ L + + L +L LDIS N + I +L + +L LK LR+
Sbjct: 268 INNLNLSSTSLADVAELPVHTLHKLTFLDISENNIRDIR--SLDHLRTLENLKHLRI 322
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 26.2 bits (55), Expect = 5.1
Identities = 21/95 (22%), Positives = 41/95 (43%)
Frame = +1
Query: 247 QNLDTFFSKEEWAALADFKPKIVDLSENSFTNVTLMADLSIEILNLSRCKIDVIENASFK 426
Q + ++ EW L+ F+P I + + V +A LS+ L L K+ + K
Sbjct: 950 QYAQPYGNENEWTGLSQFEPLIFKCTASRICKVREIASLSLTCL-LDCSKMTTFIVSQLK 1008
Query: 427 ELQEMRVLDLSYNKLTAAKLSPHAFEGKYTPEQYE 531
+ ++ ++ + KL + F K T +Q +
Sbjct: 1009 GVAGLQQNEI-HGKLLTIRAVLSCFFSKLTLQQVQ 1042
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 5.1
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 340 NVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKLTAA----KLSPHAFEG 507
N LM L+ +I L R DV + E +E ++ KL+A+ A E
Sbjct: 654 NTNLMEILNDKISVLQRQLTDVKDELDVSE-EEREEAIVAGQKLSASFELMSNEKQALEL 712
Query: 508 KYTPEQYEPLAAMRVLNLAYNDLHSLNQDLFE 603
KY+ + E + A +L+ +L L++ LFE
Sbjct: 713 KYSSLKNELINAQNLLDRREEELSELSKKLFE 744
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 601 EHLPQLEELDISGNPLTTIDHVTLIAISSLPMLKVLRMRSCQLTEIPEKFL 753
EHL L ELD + + L+T+D S + LK+ + C + K +
Sbjct: 1141 EHL--LNELDDTHSSLSTVDFTVNNTESLINSLKIFKKAGCYKLNVEHKII 1189
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 550 VLNLAYNDLHSLNQDLFEHLPQLEELDISGNPLTTIDHV 666
+++L NDLH L + H+P+L ++ N + + ++
Sbjct: 560 IIDLIRNDLHQLAKKNSVHVPELYSVEEHSNVYSLLSNI 598
>SPCC622.04 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 64 IFKKMGWAVAIFVFLFIAGAHC-EDVK 141
+FKK W ++VFLFI A+C DVK
Sbjct: 26 VFKKTQW--LLYVFLFIIFANCVVDVK 50
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 621 GAGYQWESPDHDR-SRYFDCHFEFADAQGVENAF 719
GAG +W SPD ++ + F A GV AF
Sbjct: 351 GAGSKWASPDSSSILSWYAMYIPFMAANGVLEAF 384
>SPAC3H1.10 |||phytochelatin synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -2
Query: 755 WRNFSGISVSWQERILNTLSIGKLEMAIKVT*SIVVRGFPLISSSSNCGKCSNRSWFKEC 576
WRN S + + N ++ ++ ++I + PLI SN K + FKEC
Sbjct: 270 WRNVSKHILQQAATVKNADNLAEILLSINQS------SIPLIQERSNSSKSGDFEHFKEC 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,024,180
Number of Sequences: 5004
Number of extensions: 60667
Number of successful extensions: 220
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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