Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30h19
         (210 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L09234-1|AAA35578.1|  615|Homo sapiens ATPase protein.                 60   2e-09
L09235-1|AAA83249.1|  617|Homo sapiens ATPase protein.                 51   8e-07
BT006672-1|AAP35318.1|  617|Homo sapiens ATPase, H+ transporting...    51   8e-07
BC013138-1|AAH13138.1|  617|Homo sapiens ATPase, H+ transporting...    51   8e-07
AF113129-1|AAF14870.1|  617|Homo sapiens vacuolar ATPase isoform...    51   8e-07
AJ011863-1|CAB51572.1|  762|Homo sapiens homeobox protein LSX pr...    27   8.3  

>L09234-1|AAA35578.1|  615|Homo sapiens ATPase protein.
          Length = 615

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +3

Query: 102 ANXENEERFGYVFAVSGPVVTAEKMSGSAMYELVRV 209
           ++ + E +FG+VFAVSGPVVTAE+M+GSAMYELVRV
Sbjct: 9   SDEDRESKFGFVFAVSGPVVTAERMAGSAMYELVRV 44


>L09235-1|AAA83249.1|  617|Homo sapiens ATPase protein.
          Length = 617

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 90  LRTIANXENEERFGYVFAVSGPVVTAEKMSGSAMYELVRV 209
           L  I + + E  FGYV  VSGPVVTA  M+G+AMYELVRV
Sbjct: 6   LPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRV 45


>BT006672-1|AAP35318.1|  617|Homo sapiens ATPase, H+ transporting,
           lysosomal 70kDa, V1 subunit A, isoform 1 protein.
          Length = 617

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 90  LRTIANXENEERFGYVFAVSGPVVTAEKMSGSAMYELVRV 209
           L  I + + E  FGYV  VSGPVVTA  M+G+AMYELVRV
Sbjct: 6   LPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRV 45


>BC013138-1|AAH13138.1|  617|Homo sapiens ATPase, H+ transporting,
           lysosomal 70kDa, V1 subunit A protein.
          Length = 617

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 90  LRTIANXENEERFGYVFAVSGPVVTAEKMSGSAMYELVRV 209
           L  I + + E  FGYV  VSGPVVTA  M+G+AMYELVRV
Sbjct: 6   LPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRV 45


>AF113129-1|AAF14870.1|  617|Homo sapiens vacuolar ATPase isoform
           VA68 protein.
          Length = 617

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 90  LRTIANXENEERFGYVFAVSGPVVTAEKMSGSAMYELVRV 209
           L  I + + E  FGYV  VSGPVVTA  M+G+AMYELVRV
Sbjct: 6   LPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRV 45


>AJ011863-1|CAB51572.1|  762|Homo sapiens homeobox protein LSX
           protein.
          Length = 762

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 134 CLRRIWTRRHCRKDVRICYVRVGP 205
           C+  I  RR CR ++R+C  R  P
Sbjct: 228 CVHPIIKRRQCRPEIRMCQTREKP 251


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,774,548
Number of Sequences: 237096
Number of extensions: 473204
Number of successful extensions: 938
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 76,859,062
effective HSP length: 48
effective length of database: 65,478,454
effective search space used: 1375047534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)