Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30h10
(588 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 112 3e-26
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 89 4e-19
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 71 2e-13
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 65 6e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 60 2e-10
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 56 3e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 43 3e-05
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 39 6e-04
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 38 0.001
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 29 0.38
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 1.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 3.5
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 26 4.7
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 25 8.2
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 25 8.2
SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr... 25 8.2
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 112 bits (270), Expect = 3e-26
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Frame = +2
Query: 197 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 376
++K +IT + ++V+FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84
Query: 377 DLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELI 553
DL Y +RGYPTL F+NG I YSG R+ D ++ +++K+ P V+ S + + +
Sbjct: 85 DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQL-LPTVKPISKDTLENFV 143
Query: 554 D-ANTVIVFGFF 586
+ A+ + V FF
Sbjct: 144 EKADDLAVVAFF 155
Score = 91.5 bits (217), Expect = 8e-20
Identities = 45/111 (40%), Positives = 75/111 (67%), Gaps = 4/111 (3%)
Frame = +2
Query: 176 TEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 352
++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + + ++S + +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVA 411
Query: 353 KVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKK 496
K+DAT E D+ S + G+PT+ FF+ +P+ Y G R +D+ +++ K
Sbjct: 412 KIDAT-ENDI--SVSISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDK 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 89.0 bits (211), Expect = 4e-19
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 107 IEMRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKS 286
+ + +L F AL L V +++ L T+ + + L+EFYA WCGHCKS
Sbjct: 1 MRLPLLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKS 56
Query: 287 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS-PIDYSGG 460
LAP Y + L E+ + + + K+DA D+A+ Y + G+PTL +F +GS P+ YS
Sbjct: 57 LAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNA 115
Query: 461 RQADDIISWLKKKTGPPAVEVTSAEQAKELIDAN 562
R D + ++ +KTG ++ EL N
Sbjct: 116 RDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLN 149
Score = 79.4 bits (187), Expect = 4e-16
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Frame = +2
Query: 185 NVLVLSKANFETVITTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 361
NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y + K+ + E +++ K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKIN 199
Query: 362 ATQEQDLAESYGVRGYPTLKFF---RNGSPIDYSGGRQADDIISWLKKKTG 505
A D+ + V +PT+KFF P Y G R + +I ++ KK+G
Sbjct: 200 ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 70.5 bits (165), Expect = 2e-13
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Frame = +2
Query: 122 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 301
L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 302 AKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNGSPI---DYSGGR 463
K A+ L P+ DA Q + + Y V+G+PT+K GS + DY+G R
Sbjct: 71 QKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDR 129
Query: 464 QADDIISWLKKKTGPPAVEVTSAE 535
+ ++ P V++ ++E
Sbjct: 130 SYKSLQKFVSDSI-PSKVKILTSE 152
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 65.3 bits (152), Expect = 6e-12
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Frame = +2
Query: 194 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 373
+ S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A + AKV+ ++
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQ 63
Query: 374 QDLAESYGVRGYPTLKFFRNGSPIDYSGGR--QA--DDIISWLKKKTGPPAVEVTSAEQA 541
+ +A GV+ PT FF NG ID G QA + + K TG A+ +S+
Sbjct: 64 RQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSSSAPV 123
Query: 542 K 544
K
Sbjct: 124 K 124
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 60.1 bits (139), Expect = 2e-10
Identities = 34/101 (33%), Positives = 49/101 (48%)
Frame = +2
Query: 194 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 373
V S ++ T I+ + +V+FYA WCG CK L P KL+E+ V+A +
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKF 77
Query: 374 QDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 496
D+A+ GV PT+ FR G +D G + S L K
Sbjct: 78 SDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAK 118
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 56.4 bits (130), Expect = 3e-09
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +2
Query: 194 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 373
V + F++++ + ++V+F+A WCG CK++AP++ + + S KVD Q
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60
Query: 374 QDLAESYGVRGYPTLKFFRNGSPID 448
++A GV P+ ++NG I+
Sbjct: 61 SEIAAEAGVHAMPSFFLYKNGEKIE 85
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/108 (18%), Positives = 51/108 (47%)
Frame = +2
Query: 173 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 352
PT + + A+ + +T E ++FY+ C C ++ + A ++ + +A
Sbjct: 278 PTGTSKALALDADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRM---RGKLNVA 334
Query: 353 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 496
++ + + Y ++ +PT FF+ + ++Y G D++S+ ++
Sbjct: 335 HINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEE 382
Score = 42.3 bits (95), Expect = 5e-05
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 248 VEFYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQEQDLAESYGVRGYPTLK 421
+++Y P CG CK L P + K E E S +VD ++E L+ +R PTL
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAVPTLY 104
Query: 422 FFRNGSPID 448
++NG ++
Sbjct: 105 LYQNGEIVE 113
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 38.7 bits (86), Expect = 6e-04
Identities = 22/104 (21%), Positives = 43/104 (41%)
Frame = +2
Query: 236 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 415
+ IL+ FYAPW CK + + + A++ K++A + D+AES+ V P
Sbjct: 21 QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76
Query: 416 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKE 547
+ G + + + + P +++S + E
Sbjct: 77 FVLIHGAKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE 120
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 37.5 bits (83), Expect = 0.001
Identities = 15/87 (17%), Positives = 43/87 (49%)
Frame = +2
Query: 275 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 454
HC+ A ++ + +K+A+V+ +E+++ + ++ +PT + F+ I Y+
Sbjct: 208 HCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYN 267
Query: 455 GGRQADDIISWLKKKTGPPAVEVTSAE 535
G + ++S+ + A+++ +
Sbjct: 268 GPLKYQQLLSYSNQVASYQAIKIEEGD 294
Score = 28.3 bits (60), Expect = 0.88
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 380 LAESYGVRGYPTLKFFRNGSPIDYSG--GRQADD---IISWLKKKTGPPAVEVT 526
LA YG + P++ RNG PI Y R+ D I W+ + P E+T
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 29.5 bits (63), Expect = 0.38
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +2
Query: 275 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 454
+C L P +AA L + +SP L VDA + L S+GVR + G+ +
Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240
Query: 455 GGRQADDIISWLKKKTGPPAVEVTSA 532
G A ++S K K AV+ T+A
Sbjct: 241 NGESA--LVSACKVK----AVDTTAA 260
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 183 KMCSF*VKLTLKL*LQPRSTF*LNSMLHGAATANLWHRNTP 305
K +F L LQP T N +L+ + NLW R+ P
Sbjct: 620 KSANFDFSFLKSLDLQPTITLGKNDLLNAILSQNLWFRSLP 660
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 366 VASTFASLIGDSSSASFVAALAYSGARDLQW 274
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 25.8 bits (54), Expect = 4.7
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +2
Query: 263 PWCG-HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 439
PW + ++L + + KL E + K D + L G++ Y ++ F N
Sbjct: 226 PWKNPNTENLTSQVSIKEPKLYEPHPTTAIKKADGKIIRILVIDVGMK-YNQIRCFLNRG 284
Query: 440 ------PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFG 580
P DY ++ D + ++ G P++ ++ K ++++ TV VFG
Sbjct: 285 VELLVVPWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFG 336
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 25.0 bits (52), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 443 IDYSGGRQADDIISWLKKKTGPPAVEVTSAEQA 541
++ SGG + D +I W+ K TG A ++ +A
Sbjct: 389 VNNSGGPKFDIVIPWIGKPTGFHASTISEYAEA 421
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 25.0 bits (52), Expect = 8.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 544 FSLFSRGDLNSRGASLLLQPTDDVISLTTT*IVDRT 437
F S+G+L+ SLL +D+V +TTT +VD T
Sbjct: 304 FEFDSKGNLD---VSLLKSLSDEVNMITTTSLVDNT 336
>SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.0 bits (52), Expect = 8.2
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Frame = +2
Query: 167 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIK 346
E P+ E+V + S ++ EY L + ++++ A LA+ P
Sbjct: 197 EDPSSESVNINSSSSLLPDSPVNEYGLEPHIMRFMEITETISGMRDLIAFTLAQRSGPTS 256
Query: 347 LAKVDAT--QEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK---KTGPP 511
AT Q+Q + P + N +P ++G + D+ S PP
Sbjct: 257 ALHKFATALQQQHQMQKSTSSNIP----YANPAPSGFNGSPRNGDVASLASNYRYAKQPP 312
Query: 512 AVEVTSAEQAKELIDANTV 568
+ + QA L+D N +
Sbjct: 313 TMPANAISQANRLLDQNNI 331
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,279,586
Number of Sequences: 5004
Number of extensions: 42785
Number of successful extensions: 131
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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