Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30g24
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84430-1|BAA95608.1|  589|Homo sapiens phenylalanyl tRNA synthet...    32   2.6  
BC017783-1|AAH17783.1|  589|Homo sapiens phenylalanyl-tRNA synth...    32   2.6  
BC006502-1|AAH06502.2|  585|Homo sapiens FARSB protein protein.        32   2.6  
AF042346-1|AAD02220.1|  589|Homo sapiens putative phenylalanyl-t...    32   2.6  
AC104772-1|AAX81986.1|  448|Homo sapiens unknown protein.              32   2.6  
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy...    30   7.9  

>D84430-1|BAA95608.1|  589|Homo sapiens phenylalanyl tRNA synthetase
           protein.
          Length = 589

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +1

Query: 223 VAAKRGFFRVGASRKPQIYGPLLVQATAPPVPKTVELSPLATYTA*LLFGIQKKNRSAKK 402
           +  KR    +G      + GP    A  P   K   L+    YTA  L  I K +   K 
Sbjct: 150 ICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK- 208

Query: 403 NHYLEVIINFP 435
            HYL +I N P
Sbjct: 209 -HYLHIIENKP 218


>BC017783-1|AAH17783.1|  589|Homo sapiens phenylalanyl-tRNA
           synthetase, beta subunit protein.
          Length = 589

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +1

Query: 223 VAAKRGFFRVGASRKPQIYGPLLVQATAPPVPKTVELSPLATYTA*LLFGIQKKNRSAKK 402
           +  KR    +G      + GP    A  P   K   L+    YTA  L  I K +   K 
Sbjct: 150 ICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK- 208

Query: 403 NHYLEVIINFP 435
            HYL +I N P
Sbjct: 209 -HYLHIIENKP 218


>BC006502-1|AAH06502.2|  585|Homo sapiens FARSB protein protein.
          Length = 585

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +1

Query: 223 VAAKRGFFRVGASRKPQIYGPLLVQATAPPVPKTVELSPLATYTA*LLFGIQKKNRSAKK 402
           +  KR    +G      + GP    A  P   K   L+    YTA  L  I K +   K 
Sbjct: 146 ICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK- 204

Query: 403 NHYLEVIINFP 435
            HYL +I N P
Sbjct: 205 -HYLHIIENKP 214


>AF042346-1|AAD02220.1|  589|Homo sapiens putative phenylalanyl-tRNA
           synthetase beta-subunit protein.
          Length = 589

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +1

Query: 223 VAAKRGFFRVGASRKPQIYGPLLVQATAPPVPKTVELSPLATYTA*LLFGIQKKNRSAKK 402
           +  KR    +G      + GP    A  P   K   L+    YTA  L  I K +   K 
Sbjct: 150 ICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK- 208

Query: 403 NHYLEVIINFP 435
            HYL +I N P
Sbjct: 209 -HYLHIIENKP 218


>AC104772-1|AAX81986.1|  448|Homo sapiens unknown protein.
          Length = 448

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = +1

Query: 223 VAAKRGFFRVGASRKPQIYGPLLVQATAPPVPKTVELSPLATYTA*LLFGIQKKNRSAKK 402
           +  KR    +G      + GP    A  P   K   L+    YTA  L  I K +   K 
Sbjct: 150 ICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK- 208

Query: 403 NHYLEVIINFP 435
            HYL +I N P
Sbjct: 209 -HYLHIIENKP 218


>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dynein
            type 3 protein.
          Length = 4116

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 355  RCTWLMVIVPLFSGQEVLWPAPIMGRKFGASD 260
            + TWL  + P+FS ++++   P  GRKFG  D
Sbjct: 1087 QATWLY-LEPIFSSEDIIAQMPEEGRKFGIVD 1117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,100,480
Number of Sequences: 237096
Number of extensions: 2027889
Number of successful extensions: 3927
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3927
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)