Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30g17
         (553 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434...    27   7.5  
08_02_0871 - 22075553-22075731,22075815-22076028,22076309-220763...    27   7.5  

>11_06_0151 -
           20643032-20643085,20643202-20643307,20643415-20643495,
           20643588-20643715,20643829-20643903,20644853-20645374,
           20646622-20646687,20647990-20648076,20648173-20648247,
           20648705-20648821,20648932-20649015,20649152-20649217,
           20649352-20649417,20650079-20650150,20650231-20650332,
           20650428-20650605,20650700-20650755,20653159-20653269,
           20653354-20653422,20653558-20653741,20653826-20653914,
           20654070-20654147,20654509-20654631,20654755-20654874,
           20654975-20655055,20655285-20655431,20655533-20655611,
           20657114-20657223,20659138-20659236,20659467-20659582,
           20659673-20659781,20659839-20660069,20660152-20660417,
           20661349-20661506,20661601-20661751,20661897-20661966,
           20662203-20662232
          Length = 1451

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -3

Query: 95  ITNYTILXRGCAEKFWKGHH----*CVNIEKEKNK 3
           +TN   +  G  EK ++GHH     C+N++ + N+
Sbjct: 299 VTNLRTVVEGTIEKLFEGHHINYIECINVDYKSNR 333


>08_02_0871 -
           22075553-22075731,22075815-22076028,22076309-22076351,
           22076557-22076616,22077522-22077593,22078163-22078368,
           22078782-22078837,22079540-22079777,22079908-22080081,
           22080157-22080292,22080822-22080853,22081563-22081619,
           22081713-22081965,22082057-22082145,22082590-22082643,
           22084016-22084207,22085338-22085499
          Length = 738

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 54  FFCTSPXQDSVIGNCLYLRL 113
           FFCT+  +D  IGN LY  L
Sbjct: 423 FFCTNQDEDEAIGNGLYHHL 442


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,174,320
Number of Sequences: 37544
Number of extensions: 126629
Number of successful extensions: 167
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)