Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30g07
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 40 0.003
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 39 0.004
Z46935-6|CAL36509.1| 128|Caenorhabditis elegans Hypothetical pr... 31 0.68
AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical ... 30 2.1
AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical ... 29 4.8
Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical pr... 28 6.3
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81583-5|CAB04673.1| 574|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 28 8.3
U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical pr... 28 8.3
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 28 8.3
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 28 8.3
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 28 8.3
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Frame = +3
Query: 393 EENVQRLIASVQVWKNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLSCLGFIV 572
+++V++ IA+ +++ ++ T + V +G WSD+ G RK+ +L + G F++ +
Sbjct: 118 QDDVEKDIANTKIYLQIMGTIPTLIVSPLIGNWSDRNG-RKSPLLFSLFGLFINNFILLC 176
Query: 573 NTYFFYELPVEVTAFTESIFPAITGGWFTNFIGAFSYVGDITTVENR------TYRVGLV 734
T + + V F + GG F + + V D + + +RVGL
Sbjct: 177 ATLTYETVNVYYWFFISEFMLGMFGGGAATFSTSLAIVTDDCRHKLKPGSSTVPFRVGLA 236
Query: 735 NMFMSLG 755
+ S+G
Sbjct: 237 SFVQSIG 243
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 38.7 bits (86), Expect = 0.004
Identities = 35/167 (20%), Positives = 72/167 (43%)
Frame = +3
Query: 255 YVMPSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASVQVW 434
Y++ S L QNL +K C + ++ C ++ + +A N I+S+ +
Sbjct: 17 YMLGSYLNYPVFQNLIYEKECLIKYQQNETFCRNVSAYYDDKDIQAAANHFYFISSLTLL 76
Query: 435 KNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLSCLGFIVNTYFFYELPVEVTA 614
+ T L +GA +D K +++P +G L + ++ +YF + V
Sbjct: 77 CPSLVTT------LLLGAATD-YWSIKIPLIIPYIGCILGTINYVFQSYFIH-TSVYFLL 128
Query: 615 FTESIFPAITGGWFTNFIGAFSYVGDITTVENRTYRVGLVNMFMSLG 755
++++F + GG+ +Y + + R+YR+ V + LG
Sbjct: 129 ISDALF-GLCGGFIAIISTTLTYGVKTSMLRYRSYRIAGVEGAIGLG 174
>Z46935-6|CAL36509.1| 128|Caenorhabditis elegans Hypothetical
protein M106.7 protein.
Length = 128
Score = 31.5 bits (68), Expect = 0.68
Identities = 29/123 (23%), Positives = 53/123 (43%)
Frame = +3
Query: 57 RPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDNTTV 236
+ ++ +L N + L EE +K HE C S + E KK + + N V
Sbjct: 5 KTRETMLTNQEVLSFLNALKKEEDNKQQHERCKQLSTVIYETKK--YLNTSPAVTQNEAV 62
Query: 237 EPIMACYVMPSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLI 416
C ++P LA + + +NL S L + +TE +EE++++L+
Sbjct: 63 ----ICELIPK-LAPFKLTGAETLQV--INLRPSTTADIQLLIEETEERFPSEEDLEKLV 115
Query: 417 ASV 425
++V
Sbjct: 116 STV 118
>AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical
protein Y43F8A.5 protein.
Length = 475
Score = 29.9 bits (64), Expect = 2.1
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +3
Query: 255 YVMPSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASVQVW 434
Y + S + Q+L KAC + L+ S E + + E Y A +N ++SV +
Sbjct: 10 YALTSSVFFPVFQSLIFYKAC-ITLSNSTE--PEIACKSKETY--ARDNSVHSMSSVILM 64
Query: 435 KNVVQTAIPVCVIL-FVGAWSDKTGKRKACILLPIVGEFLSCLGFIVNTYFFYELPVEVT 611
+ + +VG SD RK L+P +G F+S ++ + L
Sbjct: 65 ASSTGLCVSAFFTSRWVGHLSD-VKSRKLAFLIPFIGLFISDFTILIQV-LYPRLSPYYF 122
Query: 612 AFTESIFPAITGGWFTNFIGAFSYV 686
+E I+ GG+ + GAFS V
Sbjct: 123 IVSEVIY-GFFGGYMSITSGAFSIV 146
>AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical
protein C52E2.5 protein.
Length = 591
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/70 (20%), Positives = 34/70 (48%)
Frame = +3
Query: 264 PSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASVQVWKNV 443
P + ++A++ +S +AC +++ S V + ++ + +AS++ W+N
Sbjct: 490 PVAIKTIALRTMSFLEACLQSVDVSRSVLPYSNSTKLNKFSVPDVQSINDLASLEQWRNA 549
Query: 444 VQTAIPVCVI 473
+ I CV+
Sbjct: 550 NELEIENCVV 559
>Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical
protein T19C4.5 protein.
Length = 364
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 194 CKLFYFANVF*FQRACFVRSFRALFIVTNFQV 99
C + +F N+F C+VRS F+++N +
Sbjct: 8 CLVLFFGNIFGSSENCYVRSSIFNFLISNLSI 39
>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical protein
F18C5.3 protein.
Length = 1490
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 84 TMAVKDLKVCDDEECSKGSHETCPLKSENVRE 179
++ V++LK DEE SK + E C L + + E
Sbjct: 1379 SLLVRELKTSSDEELSKLTQEVCGLVKKKIGE 1410
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 553 DKNSPTIGSKMHAFLLPVLSLHAPTNNITHTGIAVCTTF-FQTWTLAISLCTFSSASV*F 377
+ + PT S + A++LP+ + P+ + T T + TF Q T + + F
Sbjct: 279 ETSKPTFPSTLPAYVLPMTTTSHPSTHTTTTQKVIARTFASQPHTTSQPKIVVKLLNDSF 338
Query: 376 SVCRNVKAVQTSSE*LRLTLQALSK 302
S KA T S R ++ LS+
Sbjct: 339 SNSTTDKAKSTESSASRASVSELSR 363
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 553 DKNSPTIGSKMHAFLLPVLSLHAPTNNITHTGIAVCTTF-FQTWTLAISLCTFSSASV*F 377
+ + PT S + A++LP+ + P+ + T T + TF Q T + + F
Sbjct: 279 ETSKPTFPSTLPAYVLPMTTTSHPSTHTTTTQKVIARTFASQPHTTSQPKIVVKLLNDSF 338
Query: 376 SVCRNVKAVQTSSE*LRLTLQALSK 302
S KA T S R ++ LS+
Sbjct: 339 SNSTTDKAKSTESSASRASVSELSR 363
>Z81583-5|CAB04673.1| 574|Caenorhabditis elegans Hypothetical
protein T02G6.5 protein.
Length = 574
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 93 VKDLKVCDDEECSKGSHETCPLKSENV-REIKKLTFKQRLKLIKDN-TTVEPIMACYVMP 266
V + +CD + S+ S TC LK++ V R+I KL KL +N T +P+ YV+
Sbjct: 248 VLQMDICDMLQLSRTSSNTC-LKTKKVNRKIYKLMISDP-KLHDNNLITEDPLRQVYVIE 305
Query: 267 S 269
S
Sbjct: 306 S 306
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Frame = +3
Query: 381 YTEAEENVQRLIASVQVWKNVVQTAIPVCVILFV-GAWSDKTGKRKACIL-LPIVGEFLS 554
+ E+EE+ R + + I + LFV G D RK + + +
Sbjct: 67 FMESEEHATRFLGVLDT-----SFMITYAIGLFVSGTLGDHYNPRKMLSFGMAMSAISVF 121
Query: 555 CLGFIVNTYFFYELPVEV-----TAFTESI-FP---AITGGWF 656
C GF+ Y FY P+ + F++S+ +P AI G WF
Sbjct: 122 CFGFLTEKYHFYSAPLYIFLWICNGFSQSVGWPIEVAIMGNWF 164
>U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical
protein C53B7.3 protein.
Length = 243
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 344 GLHGFNITTNGKLHGGGRKRTKTDSECPSLEKRCANGY 457
G G+N +G +G R +S+C S + C++GY
Sbjct: 195 GSSGYNTYGSGNTYGSSNSRCTYNSDCGS-NRYCSSGY 231
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 652 HPPVIAGKIDSVNAVTSTGNS*KKYVFTMKPKQDKNSPTIGSKMHAFLLPVLSLHAPTNN 473
HP ++AG D N V G + P NSPTI + HA L ++ NN
Sbjct: 56 HPSMVAGS-DPSNPVVGFGFGSPSSTTSSSPPLS-NSPTIEQQQHAQLTAMMQGIMSNNN 113
Query: 472 I 470
+
Sbjct: 114 V 114
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -1
Query: 470 HTYWYSRLH-NVFPNLDTRYQSLYVFFRLRVVFRLS 366
H Y+Y R H ++ PN+ ++ + V R+R++F LS
Sbjct: 42 HIYYYIRFHEHIAPNI-AKWDNFNVTTRIRMMFALS 76
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 652 HPPVIAGKIDSVNAVTSTGNS*KKYVFTMKPKQDKNSPTIGSKMHAFLLPVLSLHAPTNN 473
HP ++AG D N V G + P NSPTI + HA L ++ NN
Sbjct: 56 HPSMVAGS-DPSNPVVGFGFGSPSSTTSSSPPLS-NSPTIEQQQHAQLTAMMQGIMSNNN 113
Query: 472 I 470
+
Sbjct: 114 V 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,208,942
Number of Sequences: 27780
Number of extensions: 409857
Number of successful extensions: 1248
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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