Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30g01
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3100|AAF50843.2|  348|Drosophila melanogaster CG32521-P...    29   6.7  
AY121692-1|AAM52019.1|  581|Drosophila melanogaster RE54419p pro...    29   8.8  
AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein ...    29   8.8  
AF044208-1|AAC02533.1|  584|Drosophila melanogaster Strabismus p...    29   8.8  
AE013599-783|AAF58989.1|  581|Drosophila melanogaster CG8075-PA ...    29   8.8  

>AE014298-3100|AAF50843.2|  348|Drosophila melanogaster CG32521-PC,
           isoform C protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 632 GKNHAG*NRSHSSDNQLHK*PQKNNNQRSRIKFNKRPE 519
           G N+ G    HS+ N  +K P +  NQ  +  +N+R +
Sbjct: 282 GSNYQGYQSQHSNANMYNKPPPQYQNQNQQNPYNRRTQ 319


>AY121692-1|AAM52019.1|  581|Drosophila melanogaster RE54419p
           protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 608 YSTLHGFYLGFVE--IYPHYAALSLAKTRHELFCFNVSL 718
           Y +L G+   FV+  ++ HY A+ L + RH+  C+ + +
Sbjct: 271 YKSLVGYATNFVDTLLFIHYVAVVLLELRHQQPCYYIKI 309


>AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein
           protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 602 DFYSTLHGFYLGFVEIYPHYAALSLAKTRHELFCFN 709
           D YS+    YL  ++IY  +A L   KT+  + C N
Sbjct: 789 DIYSSEGNHYLSCIDIYSKFATLEQIKTKDWVECKN 824


>AF044208-1|AAC02533.1|  584|Drosophila melanogaster Strabismus
           protein.
          Length = 584

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 608 YSTLHGFYLGFVE--IYPHYAALSLAKTRHELFCFNVSL 718
           Y +L G+   FV+  ++ HY A+ L + RH+  C+ + +
Sbjct: 274 YKSLVGYATNFVDTLLFIHYVAVVLLELRHQQPCYYIKI 312


>AE013599-783|AAF58989.1|  581|Drosophila melanogaster CG8075-PA
           protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 608 YSTLHGFYLGFVE--IYPHYAALSLAKTRHELFCFNVSL 718
           Y +L G+   FV+  ++ HY A+ L + RH+  C+ + +
Sbjct: 271 YKSLVGYATNFVDTLLFIHYVAVVLLELRHQQPCYYIKI 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,817,735
Number of Sequences: 53049
Number of extensions: 511020
Number of successful extensions: 1015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)