Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30g01
(745 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.32
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.32
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 24 1.3
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 24 1.3
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 24 1.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 7.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.2
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 9.2
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.2 bits (55), Expect = 0.32
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 499 SEIISCQYYYFLN-NTKYVIKKIYYN--N*RSIPI 404
++IIS Y + N N Y KK+YYN N IP+
Sbjct: 301 TKIISSNNYNYKNYNNNYNSKKLYYNIINIEQIPV 335
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.2 bits (55), Expect = 0.32
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 499 SEIISCQYYYFLN-NTKYVIKKIYYN--N*RSIPI 404
++IIS Y + N N Y KK+YYN N IP+
Sbjct: 312 TKIISSNNYNYKNYNNNYNSKKLYYNIINIEQIPV 346
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 423 IKEVFQ*IKR*KKTVRFVEALYKDVYKI 340
++E+ IK KKT RF ++ KDVY I
Sbjct: 123 LEEILDEIK--KKTTRFQDSRSKDVYLI 148
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 423 IKEVFQ*IKR*KKTVRFVEALYKDVYKI 340
++E+ IK KKT RF ++ KDVY I
Sbjct: 123 LEEILDEIK--KKTTRFQDSRSKDVYLI 148
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 423 IKEVFQ*IKR*KKTVRFVEALYKDVYKI 340
++E+ IK KKT RF ++ KDVY I
Sbjct: 123 LEEILDEIK--KKTTRFQDSRSKDVYLI 148
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -1
Query: 520 NGDNLYRSEIISCQYYYFLNNTKYVIKKIYYN--N*RSIPI 404
+ +N Y + + Y + NN KK+YYN N IP+
Sbjct: 324 HNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYNIINIEQIPV 364
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 596 KNDFYSTLHGFYLGFVEIYPHYAALSLAKTRHELF 700
+++ S L+ +GF I Y+A L K +ELF
Sbjct: 268 RHENVSILYADIVGFTAISSTYSASELVKILNELF 302
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.0
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -1
Query: 463 NNTKYVIKKIYYN--N*RSIPI 404
NN K KK+YYN N IP+
Sbjct: 327 NNYKNYNKKLYYNIINIEQIPV 348
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 481 QYYYFLNNTKYVIKKIYYN 425
+Y Y NN KK+YYN
Sbjct: 97 KYNYNNNNYNNNCKKLYYN 115
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 481 QYYYFLNNTKYVIKKIYYN 425
+Y Y NN KK+YYN
Sbjct: 97 KYNYNNNNYNNNCKKLYYN 115
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 481 QYYYFLNNTKYVIKKIYYN 425
+Y Y NN KK+YYN
Sbjct: 97 KYNYNNNNYNNNCKKLYYN 115
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 481 QYYYFLNNTKYVIKKIYYN 425
+Y Y NN KK+YYN
Sbjct: 97 KYNYNNNNYNNNCKKLYYN 115
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 659 NEDKSQQSQGKNHAG*NRSHSSDNQLHK*PQKNNNQ 552
N +++ Q N+ N ++ +N+ + QKNNNQ
Sbjct: 416 NNNQNDNIQNTNNQ--NDNNQKNNKKNANNQKNNNQ 449
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,917
Number of Sequences: 438
Number of extensions: 3833
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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