Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30f16
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 121 5e-28
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 110 1e-24
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 100 2e-21
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 49 4e-06
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 48 9e-06
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 46 2e-05
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 46 4e-05
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 45 5e-05
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 41 0.001
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 37 0.017
01_06_1249 - 35714645-35716003,35716700-35716761,35717007-357171... 30 2.0
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 121 bits (292), Expect = 5e-28
Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 6/177 (3%)
Frame = +3
Query: 141 ETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPHV 314
E + R++ +G++ ++ PL IV G Q++YDE G+RYLDC + V GHCHP +
Sbjct: 68 EILAKRKQFLGSSV-FYYYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTVSCGHCHPDI 126
Query: 315 VEAGRNQMSLIS-TNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARI 491
V A Q L+ T YL+ +V A+ L + +P +L V +FVNSG+EAN+LA+ MAR+
Sbjct: 127 VNAVVEQTKLLQHTTTIYLNQPIVEFAEALASKMPGNLKVVYFVNSGTEANELAMLMARL 186
Query: 492 HTKKKDVITLDHAYHGHLTTMIDIS---PYKFNLPGGPEKPDWVHVAPVPDVYRGKY 653
++ ++I L +AYHG I ++ +K+ +P G +H PD YRG +
Sbjct: 187 YSGNLNMIALRNAYHGGSAGTIGLTGLQTWKYPIPQGE-----IHHVMNPDPYRGTF 238
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 110 bits (264), Expect = 1e-24
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Frame = +3
Query: 192 FRSSPLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPHVVEAGRNQMSLISTNN-R 362
F S PL IV G Q+++DE G RYLD +A V GHCHP VV A Q + +
Sbjct: 60 FYSKPLNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVL 119
Query: 363 YLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIHTKKKDVITLDHAYHGH 542
YL+ + A+ L + +P L V FF NSG+EAN+LA+ MAR++T D+I+L ++YHG+
Sbjct: 120 YLNHAIADFAEALASKMPGDLKVVFFTNSGTEANELAIMMARLYTGSHDIISLRNSYHGN 179
Query: 543 LTTMIDISPYKFNLPGGPEKPDWVHVAPVPDVYRGKYTHPAD 668
+ + K N + VH A PD YRG + A+
Sbjct: 180 AAGTMGATAQK-NWKFSVVQ-SGVHHAVNPDPYRGAFGSDAE 219
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 99.5 bits (237), Expect = 2e-21
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = +3
Query: 219 RGIAQFMYDETGERYLDCINNVAHV--GHCHPHVVEAGRNQMSLISTNN-RYLHDELVIL 389
R ++++DE G RYLD +A V GHCHP VVEA NQ I + YL+ +
Sbjct: 94 RDYHKYLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADF 153
Query: 390 AQRLVNTLPESLSVCFFVNSGSEANDLALRMARIHTKKKDVITLDHAYHGHLTTMIDISP 569
A+ L +P L V FF NSG+EAN+LAL +AR++T D+I+L + YHG+ + +
Sbjct: 154 AEALAAKMPGDLKVVFFTNSGTEANELALMIARLYTGCHDIISLRNGYHGNAAGTMGATA 213
Query: 570 ---YKFNLPGGPEKPDWVHVAPVPDVYRGKY 653
+KFN VH A PD YRG +
Sbjct: 214 QCNWKFN--------TGVHHALNPDPYRGAF 236
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Frame = +3
Query: 204 PLKIVRGIAQFMYDETGERYLDCINNV--AHVGHCHPHVVEAGRNQMSLI----STNNRY 365
PL I R ++YD G++YLD + + +G P +V+A Q+ + S NR
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRT 570
Query: 366 LHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIHTK------KKDVITLDH 527
L + + L + FF NSGSEAND +++ + KK I
Sbjct: 571 TKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIARSK 630
Query: 528 AYHGHLTTMIDIS 566
+YHG +T+I S
Sbjct: 631 SYHG--STLISAS 641
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +3
Query: 234 FMYDETGERYLDCINNV--AHVGHCHPHVVEAGRNQMSLISTNNRYLHDEL---VILAQR 398
++YD G +YLD + + +G P +V+A +Q++ + + + + + LA+
Sbjct: 59 YVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPPLDLAEE 118
Query: 399 LVNTLP-ESLSVCFFVNSGSEANDLALRM 482
L++ + + FF NSGSEAND +++
Sbjct: 119 LISMFTAKEMGKVFFTNSGSEANDSQVKL 147
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 17/145 (11%)
Frame = +3
Query: 204 PLKIVRGIAQFMYDETGERYLDCINNV--AHVGHCHPHVVEAGRNQMSLI----STNNRY 365
PL I R ++YD G++Y+D + + +G P +++A +Q++ + S NR
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRT 181
Query: 366 LHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIHT------KKKDVITLDH 527
L + + L + FF NSGSEAND +++ + KK I
Sbjct: 182 TKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNALGRPNKKKFIARSK 241
Query: 528 AYHGHLTTMIDIS-----PYKFNLP 587
+YHG +S KF+LP
Sbjct: 242 SYHGSTLVSASLSGLPALHQKFDLP 266
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +3
Query: 192 FRSSPLKIVRGIAQFMYDETGERYLDCINNVA--HVGHCHPHVVEAGRNQMS-LISTNNR 362
+ S + +V G +YD G YLD +A +GH P V A Q + L+ +N
Sbjct: 78 YNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNV 137
Query: 363 YLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMAR 488
V LA+RLV FF N+G+EAN+ A++ AR
Sbjct: 138 QYTVPQVALAKRLVEA--SFADRVFFANTGTEANEAAIKFAR 177
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +3
Query: 237 MYDETGERYLDCINN--VAHVGHCHPHVVEAGRNQMSLISTNNRYLHDELVILAQRLVNT 410
M+D G Y+D + + A +GH V A + ++ E V LA+ +++
Sbjct: 97 MWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETLKKGTSFGAPCVLENV-LAEMVISA 155
Query: 411 LPESLSVCFFVNSGSEANDLALRMARIHTKKKDVITLDHAYHGHLTTMI 557
+P S+ + FVNSG+EA ALR+ R T ++ ++ + YHGH + +
Sbjct: 156 VP-SIEMVRFVNSGTEACMGALRLVRAFTGREKILKFEGCYHGHADSFL 203
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = +3
Query: 204 PLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPHVVEAGRNQMSLISTNNR-YLHD 374
P+ +G + D G +Y+D ++ + V GHCHP V+ A + Q ++ ++R + +D
Sbjct: 58 PVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRALKEQAERLTLSSRAFYND 117
Query: 375 ELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMAR 488
+ I A+ L + + +N+G+E + A+++ R
Sbjct: 118 KFPIFAEYLTSMF--GYEMMLPMNTGAEGVETAIKLVR 153
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Frame = +3
Query: 288 HVGHCHPHVVEAGRNQMSLISTNNRYLHDEL---VILAQRLVNTLP-ESLSVCFFVNSGS 455
+VG P +V+A Q++ + + + + + LA+ L++ + FF NSGS
Sbjct: 21 YVGGSEPRLVKAATEQLNKLPFYHSFWNHTTRPSLDLAKELISMFTAREMGKVFFTNSGS 80
Query: 456 EANDLALRMARIHT------KKKDVITLDHAYHGHLTTMIDIS 566
EAND +++ + KKK++I+ +YHG TT I S
Sbjct: 81 EANDSQVKIVWYYNNALGRPKKKNIISRTQSYHG--TTFISAS 121
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 36.7 bits (81), Expect = 0.017
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Frame = +3
Query: 192 FRSSPLKIVRGIAQFMYDETGERYLDCINNVA--HVGHCHPHVVEAGRNQMSLI--STNN 359
+ S + +V G +YD G YLD +A +GH P V A Q + + ++N
Sbjct: 82 YNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNV 141
Query: 360 RYLHDELVILAQRLVNTLPESLSVC------FFVNSGSEANDLALRMAR 488
+Y + + +R+ T L FF N+G+EAN+ A++ AR
Sbjct: 142 QYTVPQASL--ERVTPTAHHRLVEASFADRVFFANTGTEANEAAIKFAR 188
>01_06_1249 -
35714645-35716003,35716700-35716761,35717007-35717181,
35717276-35717301,35717917-35717983,35719803-35719945,
35720337-35720349
Length = 614
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 543 LTTMIDISPYKFNLP--GGPEKPDWVHVAPVPDVYRGKYTHPADSES 677
+TT+ D++P + ++ E+ +W+ P PDV+ G Y D E+
Sbjct: 61 VTTVADMAPIRDDMVIFQQYEREEWLLGTPYPDVFPGSYQDEPDGEA 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,921,975
Number of Sequences: 37544
Number of extensions: 389882
Number of successful extensions: 990
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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