Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30f16
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 199 1e-51
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 134 6e-32
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 94 7e-20
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 46 3e-05
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 46 3e-05
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 34 0.11
Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical pr... 29 3.1
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 199 bits (486), Expect = 1e-51
Identities = 89/180 (49%), Positives = 126/180 (70%)
Frame = +3
Query: 135 KSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHVGHCHPHV 314
K E ++ R+ +G+ CQ+F+ P + R Q++YDE ++LDCI+NV HVGHCHP V
Sbjct: 27 KEEILKRRKDTIGSKCQIFYSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHVGHCHPKV 86
Query: 315 VEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIH 494
VEA Q++ + N R++ +L A+++++TLP L F NSGSEANDLALR+AR +
Sbjct: 87 VEAISKQLATSTCNVRFVSTQLTDCAEQILSTLP-GLDTVLFCNSGSEANDLALRLARDY 145
Query: 495 TKKKDVITLDHAYHGHLTTMIDISPYKFNLPGGPEKPDWVHVAPVPDVYRGKYTHPADSE 674
TK KD I ++HAYHGH+TT +++SPYKF+ +PDWVHVAP PDV+RGK+ AD+E
Sbjct: 146 TKHKDAIVIEHAYHGHVTTTMELSPYKFDHGSTVSQPDWVHVAPCPDVFRGKH-RLADNE 204
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 134 bits (324), Expect = 6e-32
Identities = 60/134 (44%), Positives = 88/134 (65%)
Frame = +3
Query: 135 KSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHVGHCHPHV 314
K E ++ R+ +G+ CQ+F+ P + R Q++YDE ++LDCI+NV HVGHCHP V
Sbjct: 27 KEEILKRRKDTIGSKCQIFYSDDPFMVSRASMQYLYDEKSNKFLDCISNVQHVGHCHPKV 86
Query: 315 VEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIH 494
VEA Q++ + N R++ +L A+++++TLP L F NSGSEANDLALR+AR +
Sbjct: 87 VEAISKQLATSTCNVRFVSTQLTDCAEQILSTLP-GLDTVLFCNSGSEANDLALRLARDY 145
Query: 495 TKKKDVITLDHAYH 536
TK KD I ++ H
Sbjct: 146 TKHKDAIVIEQLVH 159
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 94.3 bits (224), Expect = 7e-20
Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = +3
Query: 207 LKIVRGIAQFMYDETGERYLDCINNVA--HVGHCHPHVVEAGRNQ-MSLISTNNRYLHDE 377
L I +G QF++D G++YLD + VGHCHP + A Q L T + Y +
Sbjct: 23 LLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKINAALTEQAQKLWHTTSIYHTEP 82
Query: 378 LVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIHTKKKDVITLDHAYHGHLTTMI 557
+ A++L++ P L+ FFVNSGSEANDLAL +AR +T + DVI++ + YHG T++
Sbjct: 83 IYEYAEKLLSKFPSKLNSVFFVNSGSEANDLALALARNYTGRFDVISMRNGYHGMTQTVL 142
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +3
Query: 138 SETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPH 311
S+ I REK G C + + P+ + +G F++D G++Y D + + V GHCHP
Sbjct: 21 SQQIFDREKKFG--CHNY-KPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPK 77
Query: 312 VVEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMAR 488
+++ + Q S ++ +R ++ ++ + V L + V +N+G EA + A+++AR
Sbjct: 78 LLKVVQEQASTLTLTSRAFYNNVLGEYEEYVTKLFKYDKV-LPMNTGVEACESAVKLAR 135
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +3
Query: 138 SETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVAHV--GHCHPH 311
S+ I REK G C + + P+ + +G F++D G++Y D + + V GHCHP
Sbjct: 21 SQQIFDREKKFG--CHNY-KPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPK 77
Query: 312 VVEAGRNQMSLISTNNRYLHDELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMAR 488
+++ + Q S ++ +R ++ ++ + V L + V +N+G EA + A+++AR
Sbjct: 78 LLKVVQEQASTLTLTSRAFYNNVLGEYEEYVTKLFKYDKV-LPMNTGVEACESAVKLAR 135
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 138 SETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCI--NNVAHVGHCHPH 311
S+ I REK G C + + P+ + +G F++D G++Y D + + + GHCHP
Sbjct: 21 SQQIFDREKKFG--CHNY-KPLPVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPK 77
Query: 312 VVEAGRNQMSLISTNNRY 365
+++ N+ ++ N +
Sbjct: 78 LLK--DNEAVVVFAENNF 93
>Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical
protein M28.7 protein.
Length = 682
Score = 31.1 bits (67), Expect = 0.76
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +3
Query: 327 RNQMSLISTNNRYLHD----ELVILAQRLVNTLPESLSVCFFVNSGSEANDLALRMARIH 494
RN++ T+ Y + +L L QRL PE + F V+ S++ + +MA I
Sbjct: 61 RNRIEKAKTDETYKKENALEQLDKLKQRLTALSPEKEQLSFSVSVDSQSEEEKPKMAAIG 120
Query: 495 TKKKDVITLDHAYHGHLTTMIDISPYKFN--LPGGPEKPDWVHVAPVP 632
+K + D + + I + + + LP P+ P H P P
Sbjct: 121 RRKSTMYNDDESEDSDNDSEIIETDVQLDDPLPSQPQPPQQQHQQPQP 168
>Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical
protein H25K10.5 protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 146 HSTSRETCWSGVPTVFPFF 202
++T+ +TCW G P VF FF
Sbjct: 171 NNTALDTCWLGKPEVFTFF 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,118,278
Number of Sequences: 27780
Number of extensions: 339894
Number of successful extensions: 960
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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