Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt30f15
         (311 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   1.5  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   2.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   6.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   6.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   6.0  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    20   8.0  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    20   8.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 294  ILYFTITYSNIHNYNLT 244
            ILYFTI Y  I+ ++ T
Sbjct: 1529 ILYFTIQYRPINEFHWT 1545


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 294  ILYFTITYSNIHNYNLT 244
            ILYFTI Y  I+ ++ T
Sbjct: 1525 ILYFTIQYRPINEFHWT 1541


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 186 CNP*TKCVLRTYVFRLYSFQLNCNCVYCY 272
           CN     +   Y  R Y  ++NC  V  Y
Sbjct: 195 CNVLATSLTEPYTLRNYGRRINCTYVALY 223


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 86  KICYQ*KMDLLSQRISCKKCTICKAIN 166
           K+C Q   +L S     ++ T CKA N
Sbjct: 543 KLCQQCVGNLASNNDRIRQVTKCKATN 569


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 86  KICYQ*KMDLLSQRISCKKCTICKAIN 166
           K+C Q   +L S     ++ T CKA N
Sbjct: 543 KLCQQCVGNLASNNDRIRQVTKCKATN 569


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 86  KICYQ*KMDLLSQRISCKKCTICKAIN 166
           K+C Q   +L S     ++ T CKA N
Sbjct: 543 KLCQQCVGNLASNNDRIRQVTKCKATN 569


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 128 FFATVNPFFIGSRSF*G 78
           FF++V+P  +GS ++ G
Sbjct: 99  FFSSVSPTSLGSENYTG 115


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 43  FGLLGVLMGSWWP*KDLLPIKNGFTVAKN 129
           FGL+G    + W    LL  +N   VAKN
Sbjct: 317 FGLVGDTSLACWNENRLLDRRNIEVVAKN 345


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 90  SATNKKWIYCRKEYHARNV 146
           S TNK W+   + Y + N+
Sbjct: 437 SQTNKTWLPVNENYKSLNL 455


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 134 CKKCTICKAINIFRNSDM*SINE 202
           CKKCT  +  N+ + ++  + NE
Sbjct: 75  CKKCTEIQKQNLDKLAEWFTTNE 97


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 134 CKKCTICKAINIFRNSDM*SINE 202
           CKKCT  +  N+ + ++  + NE
Sbjct: 75  CKKCTEIQKQNLDKLAEWFTTNE 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,211
Number of Sequences: 438
Number of extensions: 1703
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)