Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30f13
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 32 1.8
BC041329-1|AAH41329.1| 268|Homo sapiens ELL associated factor 1... 31 3.2
BC050621-1|AAH50621.2| 210|Homo sapiens potassium large conduct... 31 4.2
BC042446-1|AAH42446.2| 210|Homo sapiens potassium large conduct... 31 4.2
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 4.2
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 4.2
AF272973-1|AAK58687.1| 268|Homo sapiens EAF1 protein. 31 4.2
AF215891-1|AAF75596.1| 210|Homo sapiens large conductance calci... 31 4.2
AF207992-1|AAF28333.1| 210|Homo sapiens large-conductance calci... 31 4.2
AF170917-1|AAF89699.1| 210|Homo sapiens calcium-activated potas... 31 4.2
AF160967-1|AAF69805.1| 210|Homo sapiens large-conductance calci... 31 4.2
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 5.5
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.5
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 5.5
Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein. 30 7.3
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 30 7.3
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 30 7.3
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 30 9.6
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 30 9.6
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 287 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 415
PKP L+P L +P +P++P+ + L Q + PET+ S L
Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558
>BC041329-1|AAH41329.1| 268|Homo sapiens ELL associated factor 1
protein.
Length = 268
Score = 31.5 bits (68), Expect = 3.2
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +2
Query: 176 HGTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 355
H T L K S S K++ R + I Q+ +PP+ S P P P+
Sbjct: 92 HDTGEFVLEKLSSSIQVKKT-RAEGSSKIQARMEQQPTRPPQTS------QPPPPPPPMP 144
Query: 356 SLTLTQTASGPETSPASDNLS 418
T+ GP+TSP DN S
Sbjct: 145 FRAPTKPPVGPKTSPLKDNPS 165
>BC050621-1|AAH50621.2| 210|Homo sapiens potassium large
conductance calcium-activated channel, subfamily M, beta
member protein.
Length = 210
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 637 NSQSNKHRCLH---HRSLTSPGCSSVPP 711
NS+SN LH H+ LT+P CS +PP
Sbjct: 91 NSESNSRALLHSDEHQLLTNPKCSYIPP 118
>BC042446-1|AAH42446.2| 210|Homo sapiens potassium large
conductance calcium-activated channel, subfamily M, beta
member protein.
Length = 210
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 637 NSQSNKHRCLH---HRSLTSPGCSSVPP 711
NS+SN LH H+ LT+P CS +PP
Sbjct: 91 NSESNSRALLHSDEHQLLTNPKCSYIPP 118
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +2
Query: 287 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 421
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +2
Query: 287 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 421
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>AF272973-1|AAK58687.1| 268|Homo sapiens EAF1 protein.
Length = 268
Score = 31.1 bits (67), Expect = 4.2
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +2
Query: 176 HGTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 355
H T L K S S K++ R + I Q+ +PP+ S P P P+
Sbjct: 92 HDTGEYVLEKLSSSIQVKKT-RAEGSSKIQARMEQQPTRPPQTS------QPPPPPPPMP 144
Query: 356 SLTLTQTASGPETSPASDNLS 418
T+ GP+TSP DN S
Sbjct: 145 FRAPTKPPVGPKTSPLKDNPS 165
>AF215891-1|AAF75596.1| 210|Homo sapiens large conductance
calcium-dependent potassium ion channel beta 4 subunit
protein.
Length = 210
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 637 NSQSNKHRCLH---HRSLTSPGCSSVPP 711
NS+SN LH H+ LT+P CS +PP
Sbjct: 91 NSESNSRALLHSDEHQLLTNPKCSYIPP 118
>AF207992-1|AAF28333.1| 210|Homo sapiens large-conductance
calcium-activated potassium channel beta subunit
protein.
Length = 210
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 637 NSQSNKHRCLH---HRSLTSPGCSSVPP 711
NS+SN LH H+ LT+P CS +PP
Sbjct: 91 NSESNSRALLHSDEHQLLTNPKCSYIPP 118
>AF170917-1|AAF89699.1| 210|Homo sapiens calcium-activated
potassium channel beta 4 subunit protein.
Length = 210
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 637 NSQSNKHRCLH---HRSLTSPGCSSVPP 711
NS+SN LH H+ LT+P CS +PP
Sbjct: 91 NSESNSRALLHSDEHQLLTNPKCSYIPP 118
>AF160967-1|AAF69805.1| 210|Homo sapiens large-conductance
calcium-activated potassium channel beta subunit
protein.
Length = 210
Score = 31.1 bits (67), Expect = 4.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 637 NSQSNKHRCLH---HRSLTSPGCSSVPP 711
NS+SN LH H+ LT+P CS +PP
Sbjct: 91 NSESNSRALLHSDEHQLLTNPKCSYIPP 118
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 5.5
Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Frame = +2
Query: 287 PKPPELSPIYLPVSPVM------PVQPLTSLTL---TQTASGPETSPASDNLSVPSSDTW 439
P PP +PI P S P P T+ T T T S P T+ S ++ ++
Sbjct: 993 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP 1052
Query: 440 DKXXXXXXXXXXXXXXXDTLSDQPWVVPEVEESMTSKPLGMQ--S*PAVTLVS*MKSTAS 613
+ P P + T+ P S P T+ + +T
Sbjct: 1053 TTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP 1112
Query: 614 SRDCTTLATAKATNIAAYITAHLLPP 691
S TT+ T T ++ +T LPP
Sbjct: 1113 SPPTTTMTTLPPTTTSSPLTTTPLPP 1138
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.7 bits (66), Expect = 5.5
Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Frame = +2
Query: 287 PKPPELSPIYLPVSPVM------PVQPLTSLTL---TQTASGPETSPASDNLSVPSSDTW 439
P PP +PI P S P P T+ T T T S P T+ S ++ ++
Sbjct: 276 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP 335
Query: 440 DKXXXXXXXXXXXXXXXDTLSDQPWVVPEVEESMTSKPLGMQ--S*PAVTLVS*MKSTAS 613
+ P P + T+ P S P T+ + +T
Sbjct: 336 TTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP 395
Query: 614 SRDCTTLATAKATNIAAYITAHLLPP 691
S TT+ T T ++ +T LPP
Sbjct: 396 SPPTTTMTTLPPTTTSSPLTTTPLPP 421
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 5.5
Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Frame = +2
Query: 287 PKPPELSPIYLPVSPVM------PVQPLTSLTL---TQTASGPETSPASDNLSVPSSDTW 439
P PP +PI P S P P T+ T T T S P T+ S ++ ++
Sbjct: 1618 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP 1677
Query: 440 DKXXXXXXXXXXXXXXXDTLSDQPWVVPEVEESMTSKPLGMQ--S*PAVTLVS*MKSTAS 613
+ P P + T+ P S P T+ + +T
Sbjct: 1678 TTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP 1737
Query: 614 SRDCTTLATAKATNIAAYITAHLLPP 691
S TT+ T T ++ +T LPP
Sbjct: 1738 SPPTTTMTTLPPTTTSSPLTTTPLPP 1763
>Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein.
Length = 98
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 179 GTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 358
GTT + S +S S + P + PE +P SPV P TS
Sbjct: 3 GTTPSAVPTTSITSAPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 56
Query: 359 LTLTQTASGPETSPA----SDNLSVPSSDT 436
+ T T SGP T+P+ + +SVP++ T
Sbjct: 57 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 86
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 30.3 bits (65), Expect = 7.3
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 179 GTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 358
GTT + S +S S + P + PE +P SPV P TS
Sbjct: 157 GTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 210
Query: 359 LTLTQTASGPETSPA----SDNLSVPSSDT 436
+ T T SGP T+P+ + +SVP++ T
Sbjct: 211 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 240
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 284 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 424
W PE +Y PV+PV + PL S +TL +S P PAS S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.9 bits (64), Expect = 9.6
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +2
Query: 74 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTLTKASP--SSTFKRS*RTW 247
Q+PT PS + + T K P S + +S T SP S T + T
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPT--SPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 248 PARAIMQVKHQ-RWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS 418
P + + PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1872 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1931
Query: 419 VPS 427
S
Sbjct: 1932 PTS 1934
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.9 bits (64), Expect = 9.6
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +2
Query: 74 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTLTKASP--SSTFKRS*RTW 247
Q+PT PS + + T K P S + +S T SP S T + T
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPT--SPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 248 PARAIMQVKHQ-RWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS 418
P + + PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1872 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1931
Query: 419 VPS 427
S
Sbjct: 1932 PTS 1934
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,304,110
Number of Sequences: 237096
Number of extensions: 2295753
Number of successful extensions: 7883
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7875
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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