Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30f04
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075322-1|AAL68189.2| 269|Drosophila melanogaster GH08937p pro... 306 2e-83
AE014298-2589|AAF48745.1| 242|Drosophila melanogaster CG5703-PA... 305 3e-83
AY089390-1|AAL90128.1| 238|Drosophila melanogaster AT21479p pro... 186 3e-47
AE014296-2883|AAF49361.1| 238|Drosophila melanogaster CG6485-PA... 186 3e-47
AY061479-1|AAL29027.1| 546|Drosophila melanogaster LD44506p pro... 31 2.0
AE014297-2927|AAF55847.2| 546|Drosophila melanogaster CG5745-PA... 31 2.0
BT024356-1|ABC86418.1| 317|Drosophila melanogaster IP08469p pro... 29 4.6
AE013599-143|AAF57283.2| 246|Drosophila melanogaster CG7849-PA,... 29 4.6
AE013599-142|AAM68342.1| 317|Drosophila melanogaster CG7849-PB,... 29 4.6
>AY075322-1|AAL68189.2| 269|Drosophila melanogaster GH08937p
protein.
Length = 269
Score = 306 bits (751), Expect = 2e-83
Identities = 140/213 (65%), Positives = 172/213 (80%)
Frame = +1
Query: 58 KMLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 237
+ML++ + R + R+I T+++R D+LFVHRDTPEDNP+IPFEF+ N+KRVEA+
Sbjct: 27 RMLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAI 86
Query: 238 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 417
L+IYPEGHKRGAMIPLLDLAQRQ G WLPISAMHKVAEIL LP MRVYEVATFYTMF+R+
Sbjct: 87 LSIYPEGHKRGAMIPLLDLAQRQYG-WLPISAMHKVAEILQLPNMRVYEVATFYTMFMRK 145
Query: 418 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 597
P GKYH+QVCTTTPCWLRGSD IL K++ VG + KF++SEVECLGACVNAPM
Sbjct: 146 PTGKYHIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPM 205
Query: 598 IQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGP 696
+ +NDDYYEDL+ +D ++I++ LK D+ PGP
Sbjct: 206 VAINDDYYEDLTSKDMQDILNDLKADKISPPGP 238
>AE014298-2589|AAF48745.1| 242|Drosophila melanogaster CG5703-PA
protein.
Length = 242
Score = 305 bits (749), Expect = 3e-83
Identities = 140/212 (66%), Positives = 171/212 (80%)
Frame = +1
Query: 61 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 240
ML++ + R + R+I T+++R D+LFVHRDTPEDNP+IPFEF+ N+KRVEA+L
Sbjct: 1 MLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAIL 60
Query: 241 AIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 420
+IYPEGHKRGAMIPLLDLAQRQ G WLPISAMHKVAEIL LP MRVYEVATFYTMF+R+P
Sbjct: 61 SIYPEGHKRGAMIPLLDLAQRQYG-WLPISAMHKVAEILQLPNMRVYEVATFYTMFMRKP 119
Query: 421 IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 600
GKYH+QVCTTTPCWLRGSD IL K++ VG + KF++SEVECLGACVNAPM+
Sbjct: 120 TGKYHIQVCTTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPMV 179
Query: 601 QVNDDYYEDLSVEDTKEIISKLKKDEKPKPGP 696
+NDDYYEDL+ +D ++I++ LK D+ PGP
Sbjct: 180 AINDDYYEDLTSKDMQDILNDLKADKISPPGP 211
>AY089390-1|AAL90128.1| 238|Drosophila melanogaster AT21479p
protein.
Length = 238
Score = 186 bits (452), Expect = 3e-47
Identities = 88/174 (50%), Positives = 117/174 (67%)
Frame = +1
Query: 175 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 354
E ++ FEFS+ NQ+RV+ALLA YP+ +GA++PLLD+AQRQ G WL ISA+ VAE
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85
Query: 355 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 534
+ + M +E A FYTMF +P GKY V VCT+TPC LRG D I A K+ N E G +
Sbjct: 86 IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145
Query: 535 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGP 696
P +F++ E C+GACVNAP++ VNDD YEDL + I++ L+ D+ P GP
Sbjct: 146 PDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGP 199
>AE014296-2883|AAF49361.1| 238|Drosophila melanogaster CG6485-PA
protein.
Length = 238
Score = 186 bits (452), Expect = 3e-47
Identities = 88/174 (50%), Positives = 117/174 (67%)
Frame = +1
Query: 175 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 354
E ++ FEFS+ NQ+RV+ALLA YP+ +GA++PLLD+AQRQ G WL ISA+ VAE
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85
Query: 355 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 534
+ + M +E A FYTMF +P GKY V VCT+TPC LRG D I A K+ N E G +
Sbjct: 86 IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145
Query: 535 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGP 696
P +F++ E C+GACVNAP++ VNDD YEDL + I++ L+ D+ P GP
Sbjct: 146 PDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGP 199
>AY061479-1|AAL29027.1| 546|Drosophila melanogaster LD44506p
protein.
Length = 546
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +1
Query: 61 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 240
+L S R G Q L R ++Q +H D P NP IP Q Q+ E +L
Sbjct: 273 VLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL 332
Query: 241 AIYPEGH 261
I+ H
Sbjct: 333 FIWAIRH 339
>AE014297-2927|AAF55847.2| 546|Drosophila melanogaster CG5745-PA
protein.
Length = 546
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +1
Query: 61 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 240
+L S R G Q L R ++Q +H D P NP IP Q Q+ E +L
Sbjct: 273 VLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL 332
Query: 241 AIYPEGH 261
I+ H
Sbjct: 333 FIWAIRH 339
>BT024356-1|ABC86418.1| 317|Drosophila melanogaster IP08469p
protein.
Length = 317
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 388 LLHKLSFLEDLRSQPPCA*LR*VASLHFVVVPDPVKESWHL 266
L+H ++ DLR+ C+ LR V HF V ++ +WHL
Sbjct: 247 LVHDMAL--DLRTVAHCSQLRCVRHAHFDVTDSLLRHAWHL 285
>AE013599-143|AAF57283.2| 246|Drosophila melanogaster CG7849-PA,
isoform A protein.
Length = 246
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 388 LLHKLSFLEDLRSQPPCA*LR*VASLHFVVVPDPVKESWHL 266
L+H ++ DLR+ C+ LR V HF V ++ +WHL
Sbjct: 176 LVHDMAL--DLRTVAHCSQLRCVRHAHFDVTDSLLRHAWHL 214
>AE013599-142|AAM68342.1| 317|Drosophila melanogaster CG7849-PB,
isoform B protein.
Length = 317
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 388 LLHKLSFLEDLRSQPPCA*LR*VASLHFVVVPDPVKESWHL 266
L+H ++ DLR+ C+ LR V HF V ++ +WHL
Sbjct: 247 LVHDMAL--DLRTVAHCSQLRCVRHAHFDVTDSLLRHAWHL 285
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,438,609
Number of Sequences: 53049
Number of extensions: 745978
Number of successful extensions: 2283
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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