Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt30f02
(772 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4A4B Cluster: PREDICTED: similar to mitochondr... 208 9e-53
UniRef50_Q9VF89 Cluster: 39S ribosomal protein L9, mitochondrial... 200 2e-50
UniRef50_UPI0000DB7044 Cluster: PREDICTED: similar to mitochondr... 192 6e-48
UniRef50_UPI0000D56AF8 Cluster: PREDICTED: similar to CG31478-PA... 190 2e-47
UniRef50_Q9BYD2 Cluster: 39S ribosomal protein L9, mitochondrial... 89 1e-16
UniRef50_UPI0000588FBB Cluster: PREDICTED: similar to mitochondr... 83 7e-15
UniRef50_Q95X39 Cluster: Putative uncharacterized protein; n=2; ... 83 7e-15
UniRef50_Q5SZR1 Cluster: Mitochondrial ribosomal protein L9; n=1... 76 9e-13
UniRef50_Q5DC77 Cluster: SJCHGC06284 protein; n=1; Schistosoma j... 59 1e-07
UniRef50_Q54QM2 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A7S9U8 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_Q5HBE7 Cluster: Putative integral membrane protein; n=2... 36 0.84
UniRef50_Q1AXR0 Cluster: 50S ribosomal protein L9; n=1; Rubrobac... 36 1.5
UniRef50_Q2IA87 Cluster: Chloroplast 50S ribosomal protein L9; n... 35 2.6
UniRef50_P42352 Cluster: 50S ribosomal protein L9; n=31; Cyanoba... 35 2.6
UniRef50_A5P2S6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q2IM65 Cluster: 50S ribosomal protein L9; n=6; Deltapro... 34 3.4
UniRef50_A6GKV3 Cluster: 2-hydroxychromene-2-carboxylate isomera... 34 4.5
UniRef50_Q1MRG7 Cluster: 50S ribosomal protein L9; n=5; Desulfov... 34 4.5
UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core eu... 33 5.9
UniRef50_Q5CGV1 Cluster: Binding protein; n=2; Cryptosporidium|R... 33 7.9
UniRef50_Q6BYE9 Cluster: Debaryomyces hansenii chromosome A of s... 33 7.9
>UniRef50_UPI00015B4A4B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein, L9, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
ribosomal protein, L9, putative - Nasonia vitripennis
Length = 264
Score = 208 bits (509), Expect = 9e-53
Identities = 102/205 (49%), Positives = 141/205 (68%), Gaps = 1/205 (0%)
Frame = +2
Query: 161 SVMKSAII-VPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKK 337
+V KS + +P QQTRNT IL+R + PPL+KKG ++K R F+Y+LVE+T+VK K
Sbjct: 13 TVAKSLLTAIPNPVVQQTRNTVILKRVYNPPLNKKGCIPRRLKNRSFIYELVENTNVKPK 72
Query: 338 PDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEEN 517
P + I+L Q+VEG G G+ +T+ KAY F+LPGLAVYA+PEN+EKY T + +
Sbjct: 73 PPLDIILTQYVEGYGEKGEKITIKPQKAYNEFLLPGLAVYASPENIEKYLT--SKVTNKK 130
Query: 518 THSSPFVKRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIK 697
T+SS FV T+ L R+ L V MS PW L+ WH++ +FR+SGF+V + AI MP +I
Sbjct: 131 TYSSLFVPMTIRFLSRICLVVNMSIENPWVLEKWHIRTNFRRSGFIVSDEAITMPEKEIS 190
Query: 698 GPDPNLLDKEFYVTVTINQKEKVXV 772
GP+ + +KEFYVT+TIN+ EKV V
Sbjct: 191 GPNLDFENKEFYVTITINKTEKVNV 215
>UniRef50_Q9VF89 Cluster: 39S ribosomal protein L9, mitochondrial
precursor; n=4; Diptera|Rep: 39S ribosomal protein L9,
mitochondrial precursor - Drosophila melanogaster (Fruit
fly)
Length = 248
Score = 200 bits (489), Expect = 2e-50
Identities = 93/193 (48%), Positives = 131/193 (67%), Gaps = 2/193 (1%)
Frame = +2
Query: 191 TMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFV 370
T QQ R TF+L+R++ PPLHK K +M+ ++F+Y+LV+DT VKK+P+I +VL FV
Sbjct: 17 TSLQQQVRTTFVLKRKYDPPLHKTNEKPRRMRAKNFIYELVDDTLVKKRPNIEVVLKTFV 76
Query: 371 EGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENT--HSSPFVKR 544
EGVG GDV+++ + Y +LPGLA Y PEN+ K Y K E++T HSSP+ +R
Sbjct: 77 EGVGDKGDVVSMKPHFVYNKLLLPGLAAYNTPENVAK---YAKTEAEKSTVKHSSPYAQR 133
Query: 545 TMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPDPNLLDK 724
T++ L +VL V M+ EPW L+PWH+KAS RK+GF E I +P +I+GPD +K
Sbjct: 134 TVNMLETIVLAVVMNKDEPWVLEPWHIKASLRKTGFYCREECITLPKERIEGPDLKKENK 193
Query: 725 EFYVTVTINQKEK 763
+FY TVTIN+ E+
Sbjct: 194 DFYCTVTINKLEQ 206
>UniRef50_UPI0000DB7044 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L9 CG31478-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L9 CG31478-PA - Apis mellifera
Length = 254
Score = 192 bits (469), Expect = 6e-48
Identities = 91/198 (45%), Positives = 136/198 (68%), Gaps = 1/198 (0%)
Frame = +2
Query: 182 IVPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLN 361
++ + QQ+RNTFIL+R++P PLHKK K+K +HF+Y+L+EDT+VK + I +VL
Sbjct: 4 LINNVLMQQSRNTFILKRKYPVPLHKKYETRAKLKHKHFIYELIEDTNVKPQKKIDVVLL 63
Query: 362 QFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEE-NTHSSPFV 538
+ V+ +G G+ +++ KAYE ILP LAVYA PENLEKY ++ ++ THSS FV
Sbjct: 64 ENVKKIGGKGEKVSVSSQKAYETLILPKLAVYATPENLEKYLIEDQDEKKKLCTHSSQFV 123
Query: 539 KRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPDPNLL 718
+RTM+ L L ++MS PW ++ WH++ SFRK G++VPE AI +P I GP+ ++
Sbjct: 124 ERTMNVLSVCYLSLSMSMDIPWVIEKWHVRVSFRKLGYIVPEDAIILPDKTISGPNLSIE 183
Query: 719 DKEFYVTVTINQKEKVXV 772
+KEFY+ + IN +E+V V
Sbjct: 184 NKEFYILIKINNREEVKV 201
>UniRef50_UPI0000D56AF8 Cluster: PREDICTED: similar to CG31478-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG31478-PA - Tribolium castaneum
Length = 209
Score = 190 bits (464), Expect = 2e-47
Identities = 91/187 (48%), Positives = 123/187 (65%)
Frame = +2
Query: 194 MFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVE 373
+ QQ R TF+++RR P L K+G K+K RH++YDLV++T+V+KK DI ++L FVE
Sbjct: 24 LLHQQLRTTFVVKRRIKPFLAKQGEPPKKLKTRHYLYDLVKNTNVEKKSDIEVILTSFVE 83
Query: 374 GVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVKRTMD 553
+G GD +T+ N AY + +LPGLAVYA PEN KYK E + SSP +
Sbjct: 84 DLGNMGDKVTVRPNYAYYHLLLPGLAVYATPENEAKYKNTETTNVRH--FSSPRALHVIK 141
Query: 554 CLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPDPNLLDKEFY 733
L R+ L + M+ PWTLQPWH+K SFRK GF+VPE AI MP +IKGP+ +L KEFY
Sbjct: 142 ALSRISLSIIMNKDSPWTLQPWHVKTSFRKCGFIVPEYAITMPKREIKGPNLDLEGKEFY 201
Query: 734 VTVTINQ 754
+ VT+ +
Sbjct: 202 IIVTVRE 208
>UniRef50_Q9BYD2 Cluster: 39S ribosomal protein L9, mitochondrial
precursor; n=21; Euteleostomi|Rep: 39S ribosomal protein
L9, mitochondrial precursor - Homo sapiens (Human)
Length = 267
Score = 88.6 bits (210), Expect = 1e-16
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Frame = +2
Query: 206 QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 385
Q R T I+ R W PL +G K P++ RH VY LVEDT + K ++ ++L Q VE VG
Sbjct: 49 QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107
Query: 386 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVK---RTMDC 556
GD++++ + + GLAVYA+PEN + ++ EK +E K T+
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFEE-EKLLRQEGKLEKIQTKAGEATVKF 166
Query: 557 LHRLVLRVTMSNSEPWTLQPWHLKASFRKS-GFVVPESAIEMPPVQIKGPDPNLLDKEFY 733
L L V M N+ W L P + F K+ G VV +++P +P E++
Sbjct: 167 LKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVVAPHTLKLP------AEPITRWGEYW 220
Query: 734 VTVTINQKEKVXV 772
VT+N + V V
Sbjct: 221 CEVTVNGLDTVRV 233
>UniRef50_UPI0000588FBB Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L9; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L9 - Strongylocentrotus purpuratus
Length = 238
Score = 83.0 bits (196), Expect = 7e-15
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Frame = +2
Query: 203 QQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVG 382
QQ R ++RR +PPP+ K G K + K H VY + EDT+ + + ++++L + V
Sbjct: 30 QQLRTVVVVRRLFPPPVPKLGEKYTRQKKSHKVYIIEEDTTHRARQKLKLILTEDVP--S 87
Query: 383 TTGDVLTLHLNKAYENFILPGLAVYANPENLEKY-KTYEKRPLE--ENTHSSPFVKRTMD 553
G+V+ + I G AVYA+PEN++++ T +K +E E SP +T+
Sbjct: 88 NRGEVVMVDKRIGRNKLIPSGAAVYASPENIKEFVMTIQKEKVESTEEGRLSPMAMKTIK 147
Query: 554 CLHRLVLRVTMSNSEPWT-LQPWHLKASFR-KSGFVVPESAIEMP 682
L + +L V M WT + H+ +F+ + G VV E A+++P
Sbjct: 148 HLQKNMLEVRMHADSEWTEVTKDHVIHAFKQRLGVVVSEHALKLP 192
>UniRef50_Q95X39 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 276
Score = 83.0 bits (196), Expect = 7e-15
Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Frame = +2
Query: 203 QQTRNTFILRRRWPPPLHKKGG--KVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEG 376
Q +RNT++LRR + P + GG K P + Y++VE + K I ++L Q VEG
Sbjct: 17 QASRNTWVLRRVFQPEVTPPGGVQKNPNDFHDYQKYEVVEFETQKSAGPINVILLQDVEG 76
Query: 377 VGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEE--NTHSSPF-VKRT 547
+G DV+++ A ++ +L AVYA+P +L+ Y + R EE + P+ +K
Sbjct: 77 IGHQFDVVSVDRTLARKDLLLSKKAVYASPFDLKYYSDMKTRMAEELASRIRIPYELKVV 136
Query: 548 MDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPDPNLLDKE 727
L ++V+ + ++ WT+ +K+S R+ G V E+ I + I GP+ ++ K
Sbjct: 137 GRDLQKMVIPIKVNMENQWTIDRNLVKSSLRQMGVFVAENTIFLAAKPISGPNFDIEAKL 196
Query: 728 FYVTVTINQK 757
F V +NQ+
Sbjct: 197 FRFYVVVNQQ 206
>UniRef50_Q5SZR1 Cluster: Mitochondrial ribosomal protein L9; n=1;
Homo sapiens|Rep: Mitochondrial ribosomal protein L9 -
Homo sapiens (Human)
Length = 233
Score = 76.2 bits (179), Expect = 9e-13
Identities = 38/94 (40%), Positives = 57/94 (60%)
Frame = +2
Query: 206 QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 385
Q R T I+ R W PL +G K P++ RH VY LVEDT + K ++ ++L Q VE VG
Sbjct: 49 QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107
Query: 386 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYK 487
GD++++ + + GLAVYA+PEN + ++
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFE 141
>UniRef50_Q5DC77 Cluster: SJCHGC06284 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06284 protein - Schistosoma
japonicum (Blood fluke)
Length = 244
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Frame = +2
Query: 212 RNTFILRRRWP---PPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVG 382
R+ L +++P P L G +PK+ VY+ ++ + + I ++L + V G+G
Sbjct: 18 RHVVTLIKKYPRKVPSLLLAEGILPKLTSSDMVYEEIKSEKDESQC-INVLLTENVPGLG 76
Query: 383 TTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYE-KRPLEENTHSSPFVKRTMDCL 559
+ G + +H N+ + + GLA E + + K + +RP S +R L
Sbjct: 77 SIGTITPVHRNRFWRYLYIKGLAELPTEERISEMKHKQNERPRVLCGESYVLQQR----L 132
Query: 560 HRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQI 694
+ L V M++ WTL H++ + R+ G V E+ I +P I
Sbjct: 133 SNMTLYVPMNSFRDWTLNKTHIRVALRRCGISVNENCISLPKENI 177
>UniRef50_Q54QM2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 187
Score = 46.0 bits (104), Expect = 0.001
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +2
Query: 320 TSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEK 499
T KK+ + ++L + V VG G+ L + A F + GLAV+AN EN + Y+ + K
Sbjct: 32 TIAKKRTTLSVILTEDVPKVGQKGEELEVSKGYARNFFFMKGLAVHANHENRKLYEDFSK 91
Query: 500 R----PLEENTHSSPFVKRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVV--P 661
+ +S +K+ V+R N EP + ++ S ++ +V P
Sbjct: 92 NIDYSKRKGEKQNSKAIKKITTGGKLFVMRRPQENGEPIEITKDNISYSLKRRRNIVIEP 151
Query: 662 ESAIEMPPVQIKG 700
E+ + P+ G
Sbjct: 152 ENILVENPINSFG 164
>UniRef50_A7S9U8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 206
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +2
Query: 332 KKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLEKYKTYEKRPL 508
KKP ++L + ++G+G +G ++ + A NF++P AVYA PEN E++ +
Sbjct: 39 KKPKFSVILKEPMDGLGNSGQLVEVERGYA-RNFLIPQAKAVYATPENKERFLVSSEDAA 97
Query: 509 EENTHSSPFVKRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEM 679
+ + + R M L+RL L++ + + R+ VVP IE+
Sbjct: 98 KTDPEAQ-VSSRFMRFLNRLHLKIERKEGNIAVTEHNISQEYQRQHQLVVPTHCIEL 153
>UniRef50_Q5HBE7 Cluster: Putative integral membrane protein; n=2;
Ehrlichia ruminantium|Rep: Putative integral membrane
protein - Ehrlichia ruminantium (strain Welgevonden)
Length = 260
Score = 36.3 bits (80), Expect = 0.84
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -2
Query: 192 VGTIIADFITEARSPNIFVFFSSEWLILIISNKILLHNGRKVSEEKIKNNTFQPQFSI 19
+G II+ + E +SP IF +LIIS+ +++ N +K +E KN + + I
Sbjct: 183 IGVIISGYFIEHKSPEIFKIILLTTYVLIISSMLIMKNSQKNTELLDKNTNTKENYII 240
>UniRef50_Q1AXR0 Cluster: 50S ribosomal protein L9; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: 50S ribosomal protein L9 -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 149
Score = 35.5 bits (78), Expect = 1.5
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 IRIVLNQFVEGVGTTGDVLTLHLNKAY-ENFILP-GLAVYANPENLEKYKTYEKRPLEEN 517
++++L Q VE VG GD+ + +++ Y N+++P GLA A P LE+ + + E
Sbjct: 1 MQVILTQDVEKVGRRGDI--VDVSRGYVRNYLVPRGLAEVATPAKLEEARRRMEEAAERE 58
Query: 518 THSSPFVKRTMDCLHRLVLRVTMSNSE 598
+ + + L++ V+ + E
Sbjct: 59 RRLAERAEEIAETLNKSVITIEARTGE 85
>UniRef50_Q2IA87 Cluster: Chloroplast 50S ribosomal protein L9; n=1;
Isochrysis galbana|Rep: Chloroplast 50S ribosomal
protein L9 - Isochrysis galbana
Length = 198
Score = 34.7 bits (76), Expect = 2.6
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 266 GKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAY-ENFIL- 439
G P ++ R ++ + K D++++L ++G+G+ GD++ + AY +NFIL
Sbjct: 20 GVGPALQPRVAATVMMAKKAAPKGKDVQVILTGEIKGLGSAGDLVA--VKPAYAQNFILT 77
Query: 440 PGLAVYANPENLEK 481
GL A PE L++
Sbjct: 78 KGLGKMATPEMLKQ 91
>UniRef50_P42352 Cluster: 50S ribosomal protein L9; n=31;
Cyanobacteria|Rep: 50S ribosomal protein L9 -
Synechocystis sp. (strain PCC 6803)
Length = 152
Score = 34.7 bits (76), Expect = 2.6
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 344 IRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANP---ENLEKYKTYEKRPLE 511
+++VLN+ + +G TGD++ + A N+++P GL V A P +E+ + E L+
Sbjct: 5 VKVVLNETINKLGFTGDLVEVAPGYA-RNYLIPKGLGVVATPGILRQVEQRRLKELERLK 63
Query: 512 ENTHSSPFVKRTMDCLHRLVLRVTMSNSE 598
++ K ++ + R V++ + +E
Sbjct: 64 AEKDAAEARKVALETIGRFVIKKQVGEAE 92
>UniRef50_A5P2S6 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 426
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 245 PPLHKKGG-KVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQ 364
P LHK+ G K+P K R V D+V+D + PD ++L +
Sbjct: 345 PELHKRSGSKLPPHKFRQAVEDIVQDAQLSPLPDYDLILEK 385
>UniRef50_Q2IM65 Cluster: 50S ribosomal protein L9; n=6;
Deltaproteobacteria|Rep: 50S ribosomal protein L9 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 149
Score = 34.3 bits (75), Expect = 3.4
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 344 IRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLEK 481
++++L + VE +G GD++ + N++LP GLAV ANP+N+++
Sbjct: 1 MKLILREDVENLGKGGDLVDVKPGYG-RNYLLPRGLAVSANPKNVKE 46
>UniRef50_A6GKV3 Cluster: 2-hydroxychromene-2-carboxylate isomerase,
putative; n=1; Limnobacter sp. MED105|Rep:
2-hydroxychromene-2-carboxylate isomerase, putative -
Limnobacter sp. MED105
Length = 424
Score = 33.9 bits (74), Expect = 4.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 173 SAIIVPTMFSQQTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVK 331
SAI+ P +F R + R+ P+ +G VPK+K + VYD + V+
Sbjct: 248 SAIVAPRIFELGRRTGAKVNLRFVLPMVMRGLPVPKVKREYIVYDTAREAHVR 300
>UniRef50_Q1MRG7 Cluster: 50S ribosomal protein L9; n=5;
Desulfovibrionaceae|Rep: 50S ribosomal protein L9 -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 173
Score = 33.9 bits (74), Expect = 4.5
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +2
Query: 344 IRIVLNQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLE----KYKTYEKRPL 508
++++L VE +G GD++T+ N++LP GLA+ P N++ ++K ++R
Sbjct: 1 MKVILRSDVENLGRLGDIVTVKSGYG-RNYLLPQGLAMLVTPGNMKVFELEFKKLQERMN 59
Query: 509 EENTHSSPFVKRTMDCLHRLVLR 577
+ + + KR + +++R
Sbjct: 60 DIRSKADELAKRISGLIVTVLMR 82
>UniRef50_Q9LTQ0 Cluster: Similarity to CAF protein; n=3; core
eudicotyledons|Rep: Similarity to CAF protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 391
Score = 33.5 bits (73), Expect = 5.9
Identities = 13/72 (18%), Positives = 37/72 (51%)
Frame = +2
Query: 86 NRILLDIISINHSLEKKTKMFGLRASVMKSAIIVPTMFSQQTRNTFILRRRWPPPLHKKG 265
N+ + +I+ +L K +++F + + + ++ + ++ N L+++WP P++
Sbjct: 276 NKDIARLIAAKEALRKLSEVFPVEMVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVE 335
Query: 266 GKVPKMKGRHFV 301
++G+ FV
Sbjct: 336 EDRSSVQGKRFV 347
>UniRef50_Q5CGV1 Cluster: Binding protein; n=2; Cryptosporidium|Rep:
Binding protein - Cryptosporidium hominis
Length = 764
Score = 33.1 bits (72), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 46 ILYLFLRYFSSIM*Q-NFIRYYKY*PFARKKNKNVWAAGFCYEI 174
+LYLF+R+ SIM F YYK +K+ GFCY++
Sbjct: 604 VLYLFIRHVKSIMSNVTFYEYYKKPEAIKKRFAGRNTEGFCYDM 647
>UniRef50_Q6BYE9 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 815
Score = 33.1 bits (72), Expect = 7.9
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 476 EKYKTYEKRPLEENTHSSPFVKRTMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFV 655
+K K K P ENT P V ++ ++ NS P + HLK + + V
Sbjct: 142 DKEKDKPKEPENENTRRLPLVGAKKKWNKKIKPGISSFNSSPQKIGNHHLKHLLQLASIV 201
Query: 656 VPESAIEMPPV 688
VP+S P+
Sbjct: 202 VPKSQHSRTPI 212
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,378,540
Number of Sequences: 1657284
Number of extensions: 14915038
Number of successful extensions: 40244
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 38696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40229
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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